Protein–RNA interactions for Protein: O08843

Lst1, Leukocyte-specific transcript 1 protein, mousemouse

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lst1O08843 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Lst1O08843 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lst1O08843 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Lst1O08843 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lst1O08843 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lst1O08843 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lst1O08843 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lst1O08843 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lst1O08843 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lst1O08843 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lst1O08843 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lst1O08843 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Lst1O08843 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.08■□□□□ 0.48
Lst1O08843 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lst1O08843 Gm24109-201ENSMUST00000175489 103 ntBASIC18.06■□□□□ 0.48
Lst1O08843 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lst1O08843 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Lst1O08843 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Lst1O08843 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lst1O08843 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Lst1O08843 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lst1O08843 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lst1O08843 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Lst1O08843 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.96■□□□□ 0.47
Lst1O08843 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lst1O08843 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lst1O08843 Gm23366-201ENSMUST00000175022 89 ntBASIC17.95■□□□□ 0.46
Lst1O08843 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lst1O08843 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lst1O08843 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lst1O08843 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.9■□□□□ 0.46
Lst1O08843 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lst1O08843 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Lst1O08843 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lst1O08843 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lst1O08843 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Lst1O08843 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lst1O08843 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Lst1O08843 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lst1O08843 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lst1O08843 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lst1O08843 Zxda-201ENSMUST00000117281 2621 ntBASIC17.78■□□□□ 0.44
Lst1O08843 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lst1O08843 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC17.77■□□□□ 0.43
Lst1O08843 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lst1O08843 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.75■□□□□ 0.43
Lst1O08843 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lst1O08843 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lst1O08843 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lst1O08843 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lst1O08843 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.69■□□□□ 0.42
Lst1O08843 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Lst1O08843 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lst1O08843 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lst1O08843 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lst1O08843 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lst1O08843 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lst1O08843 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lst1O08843 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.65■□□□□ 0.42
Lst1O08843 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lst1O08843 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lst1O08843 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lst1O08843 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lst1O08843 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lst1O08843 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lst1O08843 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lst1O08843 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lst1O08843 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.61■□□□□ 0.41
Lst1O08843 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lst1O08843 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lst1O08843 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.58■□□□□ 0.41
Lst1O08843 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.58■□□□□ 0.41
Lst1O08843 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lst1O08843 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lst1O08843 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lst1O08843 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lst1O08843 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lst1O08843 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lst1O08843 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lst1O08843 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lst1O08843 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lst1O08843 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lst1O08843 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lst1O08843 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lst1O08843 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lst1O08843 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lst1O08843 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lst1O08843 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.46■□□□□ 0.39
Lst1O08843 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lst1O08843 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lst1O08843 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lst1O08843 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lst1O08843 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lst1O08843 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lst1O08843 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lst1O08843 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lst1O08843 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lst1O08843 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lst1O08843 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lst1O08843 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms