Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.6■■■□□ 2.17
Ercc2O08811 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.58■■■□□ 2.17
Ercc2O08811 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Ercc2O08811 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Ercc2O08811 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ercc2O08811 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ercc2O08811 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Ercc2O08811 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ercc2O08811 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ercc2O08811 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ercc2O08811 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.38■■■□□ 2.13
Ercc2O08811 Gm25262-201ENSMUST00000174934 133 ntBASIC28.37■■■□□ 2.13
Ercc2O08811 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ercc2O08811 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.28■■■□□ 2.12
Ercc2O08811 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ercc2O08811 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.26■■■□□ 2.11
Ercc2O08811 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Ercc2O08811 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ercc2O08811 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ercc2O08811 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Ercc2O08811 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Ercc2O08811 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ercc2O08811 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ercc2O08811 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Ercc2O08811 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Ercc2O08811 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ercc2O08811 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Ercc2O08811 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Ercc2O08811 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ercc2O08811 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ercc2O08811 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.02■■■□□ 2.08
Ercc2O08811 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ercc2O08811 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ercc2O08811 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.96■■■□□ 2.07
Ercc2O08811 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ercc2O08811 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ercc2O08811 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Ercc2O08811 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ercc2O08811 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.85■■■□□ 2.05
Ercc2O08811 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
Ercc2O08811 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ercc2O08811 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.78■■■□□ 2.04
Ercc2O08811 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ercc2O08811 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.74■■■□□ 2.03
Ercc2O08811 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ercc2O08811 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.73■■■□□ 2.03
Ercc2O08811 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Ercc2O08811 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ercc2O08811 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Ercc2O08811 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ercc2O08811 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Ercc2O08811 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
Ercc2O08811 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ercc2O08811 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ercc2O08811 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.58■■■□□ 2.01
Ercc2O08811 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Ercc2O08811 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ercc2O08811 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.56■■■□□ 2
Ercc2O08811 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.54■■■□□ 2
Ercc2O08811 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.52■■■□□ 2
Ercc2O08811 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.52■■■□□ 2
Ercc2O08811 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ercc2O08811 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Ercc2O08811 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ercc2O08811 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Ercc2O08811 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Ercc2O08811 Gm26115-201ENSMUST00000175605 87 ntBASIC27.46■■□□□ 1.99
Ercc2O08811 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
Ercc2O08811 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ercc2O08811 Gm27322-201ENSMUST00000184007 104 ntBASIC27.44■■□□□ 1.98
Ercc2O08811 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Ercc2O08811 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Ercc2O08811 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.41■■□□□ 1.98
Ercc2O08811 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
Ercc2O08811 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Ercc2O08811 Gm8109-201ENSMUST00000194076 746 ntBASIC27.4■■□□□ 1.98
Ercc2O08811 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.4■■□□□ 1.98
Ercc2O08811 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ercc2O08811 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ercc2O08811 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.96
Ercc2O08811 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.27■■□□□ 1.96
Ercc2O08811 Mipep-204ENSMUST00000225043 1548 ntBASIC27.26■■□□□ 1.96
Ercc2O08811 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ercc2O08811 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Ercc2O08811 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ercc2O08811 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ercc2O08811 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ercc2O08811 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ercc2O08811 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.2■■□□□ 1.94
Ercc2O08811 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Ercc2O08811 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.15■■□□□ 1.94
Ercc2O08811 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ercc2O08811 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.14■■□□□ 1.93
Ercc2O08811 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Ercc2O08811 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.09■■□□□ 1.93
Ercc2O08811 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Ercc2O08811 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.06■■□□□ 1.92
Ercc2O08811 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.04■■□□□ 1.92
Ercc2O08811 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ercc2O08811 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms