Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.97■■■□□ 2.55
Pcdh11xF6ZNL5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Pcdh11xF6ZNL5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pcdh11xF6ZNL5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.9■■■□□ 2.54
Pcdh11xF6ZNL5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Pcdh11xF6ZNL5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Pcdh11xF6ZNL5 Gm25262-201ENSMUST00000174934 133 ntBASIC30.77■■■□□ 2.52
Pcdh11xF6ZNL5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.74■■■□□ 2.51
Pcdh11xF6ZNL5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pcdh11xF6ZNL5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pcdh11xF6ZNL5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Pcdh11xF6ZNL5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pcdh11xF6ZNL5 Rab21-202ENSMUST00000218831 843 ntBASIC30.66■■■□□ 2.5
Pcdh11xF6ZNL5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Pcdh11xF6ZNL5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Pcdh11xF6ZNL5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Pcdh11xF6ZNL5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.51■■■□□ 2.48
Pcdh11xF6ZNL5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Pcdh11xF6ZNL5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Pcdh11xF6ZNL5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.41■■■□□ 2.46
Pcdh11xF6ZNL5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Pcdh11xF6ZNL5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.37■■■□□ 2.45
Pcdh11xF6ZNL5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Pcdh11xF6ZNL5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Pcdh11xF6ZNL5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pcdh11xF6ZNL5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Pcdh11xF6ZNL5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.33■■■□□ 2.45
Pcdh11xF6ZNL5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.3■■■□□ 2.44
Pcdh11xF6ZNL5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.27■■■□□ 2.44
Pcdh11xF6ZNL5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pcdh11xF6ZNL5 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.26■■■□□ 2.43
Pcdh11xF6ZNL5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.23■■■□□ 2.43
Pcdh11xF6ZNL5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pcdh11xF6ZNL5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pcdh11xF6ZNL5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pcdh11xF6ZNL5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Pcdh11xF6ZNL5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Pcdh11xF6ZNL5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Pcdh11xF6ZNL5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
Pcdh11xF6ZNL5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Pcdh11xF6ZNL5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.16■■■□□ 2.42
Pcdh11xF6ZNL5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Pcdh11xF6ZNL5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pcdh11xF6ZNL5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Pcdh11xF6ZNL5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pcdh11xF6ZNL5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pcdh11xF6ZNL5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pcdh11xF6ZNL5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pcdh11xF6ZNL5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pcdh11xF6ZNL5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
Pcdh11xF6ZNL5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Pcdh11xF6ZNL5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Pcdh11xF6ZNL5 Gm26115-201ENSMUST00000175605 87 ntBASIC30■■■□□ 2.39
Pcdh11xF6ZNL5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.99■■■□□ 2.39
Pcdh11xF6ZNL5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Pcdh11xF6ZNL5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.94■■■□□ 2.38
Pcdh11xF6ZNL5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Pcdh11xF6ZNL5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
Pcdh11xF6ZNL5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Pcdh11xF6ZNL5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Pcdh11xF6ZNL5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Pcdh11xF6ZNL5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Pcdh11xF6ZNL5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Pcdh11xF6ZNL5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.82■■■□□ 2.36
Pcdh11xF6ZNL5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Pcdh11xF6ZNL5 Gm8109-201ENSMUST00000194076 746 ntBASIC29.77■■■□□ 2.36
Pcdh11xF6ZNL5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pcdh11xF6ZNL5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Pcdh11xF6ZNL5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pcdh11xF6ZNL5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
Pcdh11xF6ZNL5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
Pcdh11xF6ZNL5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
Pcdh11xF6ZNL5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
Pcdh11xF6ZNL5 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.63■■■□□ 2.33
Pcdh11xF6ZNL5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
Pcdh11xF6ZNL5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Pcdh11xF6ZNL5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.58■■■□□ 2.33
Pcdh11xF6ZNL5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Pcdh11xF6ZNL5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Pcdh11xF6ZNL5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Pcdh11xF6ZNL5 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.53■■■□□ 2.32
Pcdh11xF6ZNL5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
Pcdh11xF6ZNL5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pcdh11xF6ZNL5 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.46■■■□□ 2.31
Pcdh11xF6ZNL5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Pcdh11xF6ZNL5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Pcdh11xF6ZNL5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Pcdh11xF6ZNL5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
Pcdh11xF6ZNL5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.43■■■□□ 2.3
Pcdh11xF6ZNL5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
Pcdh11xF6ZNL5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Pcdh11xF6ZNL5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Pcdh11xF6ZNL5 Mipep-204ENSMUST00000225043 1548 ntBASIC29.39■■■□□ 2.3
Pcdh11xF6ZNL5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Pcdh11xF6ZNL5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
Pcdh11xF6ZNL5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Pcdh11xF6ZNL5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Pcdh11xF6ZNL5 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.31■■■□□ 2.28
Pcdh11xF6ZNL5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Pcdh11xF6ZNL5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 7.1 ms