Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11127A7VMS2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11127A7VMS2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Gm11127A7VMS2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Gm11127A7VMS2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.94■■□□□ 1.42
Gm11127A7VMS2 Gm25238-201ENSMUST00000174914 89 ntBASIC23.89■■□□□ 1.41
Gm11127A7VMS2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
Gm11127A7VMS2 Gm27325-201ENSMUST00000175467 74 ntBASIC23.87■■□□□ 1.41
Gm11127A7VMS2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Gm11127A7VMS2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.8■■□□□ 1.4
Gm11127A7VMS2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Gm11127A7VMS2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Gm11127A7VMS2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Gm11127A7VMS2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Gm11127A7VMS2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Gm11127A7VMS2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
Gm11127A7VMS2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Gm11127A7VMS2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gm11127A7VMS2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gm11127A7VMS2 Zxda-201ENSMUST00000117281 2621 ntBASIC23.69■■□□□ 1.38
Gm11127A7VMS2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Gm11127A7VMS2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.65■■□□□ 1.38
Gm11127A7VMS2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Gm11127A7VMS2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.64■■□□□ 1.37
Gm11127A7VMS2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Gm11127A7VMS2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Gm11127A7VMS2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Gm11127A7VMS2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Gm11127A7VMS2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Gm11127A7VMS2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Gm11127A7VMS2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Gm11127A7VMS2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Gm11127A7VMS2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Gm11127A7VMS2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Gm11127A7VMS2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Gm11127A7VMS2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm11127A7VMS2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Gm11127A7VMS2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Gm11127A7VMS2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Gm11127A7VMS2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Gm11127A7VMS2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
Gm11127A7VMS2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.4■■□□□ 1.34
Gm11127A7VMS2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Gm11127A7VMS2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.39■■□□□ 1.33
Gm11127A7VMS2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.33■■□□□ 1.33
Gm11127A7VMS2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Gm11127A7VMS2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Gm11127A7VMS2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm11127A7VMS2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm11127A7VMS2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Gm11127A7VMS2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.19■■□□□ 1.3
Gm11127A7VMS2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Gm11127A7VMS2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm11127A7VMS2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm11127A7VMS2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm11127A7VMS2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Gm11127A7VMS2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Gm11127A7VMS2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.14■■□□□ 1.3
Gm11127A7VMS2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Gm11127A7VMS2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.14■■□□□ 1.29
Gm11127A7VMS2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Gm11127A7VMS2 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.12■■□□□ 1.29
Gm11127A7VMS2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Gm11127A7VMS2 Rab21-202ENSMUST00000218831 843 ntBASIC23.09■■□□□ 1.29
Gm11127A7VMS2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Gm11127A7VMS2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Gm11127A7VMS2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Gm11127A7VMS2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Gm11127A7VMS2 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.01■■□□□ 1.27
Gm11127A7VMS2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Gm11127A7VMS2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Gm11127A7VMS2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Gm11127A7VMS2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.99■■□□□ 1.27
Gm11127A7VMS2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Gm11127A7VMS2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Gm11127A7VMS2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Gm11127A7VMS2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Gm11127A7VMS2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Gm11127A7VMS2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.96■■□□□ 1.27
Gm11127A7VMS2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm11127A7VMS2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm11127A7VMS2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Gm11127A7VMS2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm11127A7VMS2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Gm11127A7VMS2 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.9■■□□□ 1.26
Gm11127A7VMS2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Gm11127A7VMS2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Gm11127A7VMS2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Gm11127A7VMS2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
Gm11127A7VMS2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Gm11127A7VMS2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.86■■□□□ 1.25
Gm11127A7VMS2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.86■■□□□ 1.25
Gm11127A7VMS2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Gm11127A7VMS2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.85■■□□□ 1.25
Gm11127A7VMS2 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.84■■□□□ 1.25
Gm11127A7VMS2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Gm11127A7VMS2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Gm11127A7VMS2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Gm11127A7VMS2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Gm11127A7VMS2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms