Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Igkv1-88A0A140T8N1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv1-88A0A140T8N1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv1-88A0A140T8N1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Igkv1-88A0A140T8N1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv1-88A0A140T8N1 Gm27325-201ENSMUST00000175467 74 ntBASIC17.71■□□□□ 0.43
Igkv1-88A0A140T8N1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv1-88A0A140T8N1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.69■□□□□ 0.42
Igkv1-88A0A140T8N1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv1-88A0A140T8N1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv1-88A0A140T8N1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv1-88A0A140T8N1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv1-88A0A140T8N1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv1-88A0A140T8N1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Igkv1-88A0A140T8N1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv1-88A0A140T8N1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC17.63■□□□□ 0.41
Igkv1-88A0A140T8N1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Igkv1-88A0A140T8N1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv1-88A0A140T8N1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv1-88A0A140T8N1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv1-88A0A140T8N1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv1-88A0A140T8N1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv1-88A0A140T8N1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv1-88A0A140T8N1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.51■□□□□ 0.39
Igkv1-88A0A140T8N1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv1-88A0A140T8N1 Gm25238-201ENSMUST00000174914 89 ntBASIC17.49■□□□□ 0.39
Igkv1-88A0A140T8N1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv1-88A0A140T8N1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Igkv1-88A0A140T8N1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.47■□□□□ 0.39
Igkv1-88A0A140T8N1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.47■□□□□ 0.39
Igkv1-88A0A140T8N1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv1-88A0A140T8N1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv1-88A0A140T8N1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv1-88A0A140T8N1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Igkv1-88A0A140T8N1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-88A0A140T8N1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-88A0A140T8N1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-88A0A140T8N1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.41■□□□□ 0.38
Igkv1-88A0A140T8N1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-88A0A140T8N1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.4■□□□□ 0.38
Igkv1-88A0A140T8N1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Igkv1-88A0A140T8N1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv1-88A0A140T8N1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv1-88A0A140T8N1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Igkv1-88A0A140T8N1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Igkv1-88A0A140T8N1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.31■□□□□ 0.36
Igkv1-88A0A140T8N1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv1-88A0A140T8N1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv1-88A0A140T8N1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv1-88A0A140T8N1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv1-88A0A140T8N1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Igkv1-88A0A140T8N1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv1-88A0A140T8N1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv1-88A0A140T8N1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv1-88A0A140T8N1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv1-88A0A140T8N1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv1-88A0A140T8N1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv1-88A0A140T8N1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.22■□□□□ 0.35
Igkv1-88A0A140T8N1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.22■□□□□ 0.35
Igkv1-88A0A140T8N1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv1-88A0A140T8N1 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.2■□□□□ 0.34
Igkv1-88A0A140T8N1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Igkv1-88A0A140T8N1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv1-88A0A140T8N1 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.14■□□□□ 0.34
Igkv1-88A0A140T8N1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.13■□□□□ 0.33
Igkv1-88A0A140T8N1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv1-88A0A140T8N1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv1-88A0A140T8N1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv1-88A0A140T8N1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv1-88A0A140T8N1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv1-88A0A140T8N1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv1-88A0A140T8N1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv1-88A0A140T8N1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Igkv1-88A0A140T8N1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv1-88A0A140T8N1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv1-88A0A140T8N1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv1-88A0A140T8N1 Rab21-202ENSMUST00000218831 843 ntBASIC17.06■□□□□ 0.32
Igkv1-88A0A140T8N1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.05■□□□□ 0.32
Igkv1-88A0A140T8N1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv1-88A0A140T8N1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv1-88A0A140T8N1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.04■□□□□ 0.32
Igkv1-88A0A140T8N1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv1-88A0A140T8N1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv1-88A0A140T8N1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.03■□□□□ 0.32
Igkv1-88A0A140T8N1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv1-88A0A140T8N1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Igkv1-88A0A140T8N1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.02■□□□□ 0.32
Igkv1-88A0A140T8N1 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.01■□□□□ 0.31
Igkv1-88A0A140T8N1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv1-88A0A140T8N1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.01■□□□□ 0.31
Igkv1-88A0A140T8N1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Igkv1-88A0A140T8N1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv1-88A0A140T8N1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv1-88A0A140T8N1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv1-88A0A140T8N1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv1-88A0A140T8N1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igkv1-88A0A140T8N1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Igkv1-88A0A140T8N1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Igkv1-88A0A140T8N1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igkv1-88A0A140T8N1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms