Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv3-5A0A140T8M6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv3-5A0A140T8M6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv3-5A0A140T8M6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv3-5A0A140T8M6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv3-5A0A140T8M6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Igkv3-5A0A140T8M6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Igkv3-5A0A140T8M6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Igkv3-5A0A140T8M6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv3-5A0A140T8M6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv3-5A0A140T8M6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv3-5A0A140T8M6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17■□□□□ 0.31
Igkv3-5A0A140T8M6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Igkv3-5A0A140T8M6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv3-5A0A140T8M6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv3-5A0A140T8M6 Gm25238-201ENSMUST00000174914 89 ntBASIC16.94■□□□□ 0.3
Igkv3-5A0A140T8M6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv3-5A0A140T8M6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Igkv3-5A0A140T8M6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Igkv3-5A0A140T8M6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Igkv3-5A0A140T8M6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Igkv3-5A0A140T8M6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv3-5A0A140T8M6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.91■□□□□ 0.3
Igkv3-5A0A140T8M6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv3-5A0A140T8M6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Igkv3-5A0A140T8M6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Igkv3-5A0A140T8M6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv3-5A0A140T8M6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv3-5A0A140T8M6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv3-5A0A140T8M6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Igkv3-5A0A140T8M6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv3-5A0A140T8M6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv3-5A0A140T8M6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv3-5A0A140T8M6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Igkv3-5A0A140T8M6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv3-5A0A140T8M6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv3-5A0A140T8M6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv3-5A0A140T8M6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv3-5A0A140T8M6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv3-5A0A140T8M6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC16.78■□□□□ 0.28
Igkv3-5A0A140T8M6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv3-5A0A140T8M6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.78■□□□□ 0.28
Igkv3-5A0A140T8M6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv3-5A0A140T8M6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv3-5A0A140T8M6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv3-5A0A140T8M6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC16.74■□□□□ 0.27
Igkv3-5A0A140T8M6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Igkv3-5A0A140T8M6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv3-5A0A140T8M6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv3-5A0A140T8M6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Igkv3-5A0A140T8M6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv3-5A0A140T8M6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.69■□□□□ 0.26
Igkv3-5A0A140T8M6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv3-5A0A140T8M6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.67■□□□□ 0.26
Igkv3-5A0A140T8M6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv3-5A0A140T8M6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv3-5A0A140T8M6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Igkv3-5A0A140T8M6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.65■□□□□ 0.26
Igkv3-5A0A140T8M6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Igkv3-5A0A140T8M6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Igkv3-5A0A140T8M6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv3-5A0A140T8M6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv3-5A0A140T8M6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Igkv3-5A0A140T8M6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv3-5A0A140T8M6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv3-5A0A140T8M6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv3-5A0A140T8M6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv3-5A0A140T8M6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv3-5A0A140T8M6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC16.55■□□□□ 0.24
Igkv3-5A0A140T8M6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC16.55■□□□□ 0.24
Igkv3-5A0A140T8M6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv3-5A0A140T8M6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv3-5A0A140T8M6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv3-5A0A140T8M6 Rab21-202ENSMUST00000218831 843 ntBASIC16.52■□□□□ 0.24
Igkv3-5A0A140T8M6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC16.51■□□□□ 0.23
Igkv3-5A0A140T8M6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv3-5A0A140T8M6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv3-5A0A140T8M6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv3-5A0A140T8M6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv3-5A0A140T8M6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv3-5A0A140T8M6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv3-5A0A140T8M6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv3-5A0A140T8M6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Igkv3-5A0A140T8M6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv3-5A0A140T8M6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv3-5A0A140T8M6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv3-5A0A140T8M6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Igkv3-5A0A140T8M6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv3-5A0A140T8M6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.45■□□□□ 0.22
Igkv3-5A0A140T8M6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv3-5A0A140T8M6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv3-5A0A140T8M6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Igkv3-5A0A140T8M6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv3-5A0A140T8M6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Igkv3-5A0A140T8M6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.43■□□□□ 0.22
Igkv3-5A0A140T8M6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv3-5A0A140T8M6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv3-5A0A140T8M6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv3-5A0A140T8M6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv3-5A0A140T8M6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms