Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.08■□□□□ 0.96
Trav7-1A0A0G2JEV5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav7-1A0A0G2JEV5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trav7-1A0A0G2JEV5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.99■□□□□ 0.95
Trav7-1A0A0G2JEV5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav7-1A0A0G2JEV5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav7-1A0A0G2JEV5 Gm25238-201ENSMUST00000174914 89 ntBASIC20.91■□□□□ 0.94
Trav7-1A0A0G2JEV5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav7-1A0A0G2JEV5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trav7-1A0A0G2JEV5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav7-1A0A0G2JEV5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav7-1A0A0G2JEV5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav7-1A0A0G2JEV5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.86■□□□□ 0.93
Trav7-1A0A0G2JEV5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.84■□□□□ 0.93
Trav7-1A0A0G2JEV5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav7-1A0A0G2JEV5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.83■□□□□ 0.92
Trav7-1A0A0G2JEV5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav7-1A0A0G2JEV5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.81■□□□□ 0.92
Trav7-1A0A0G2JEV5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav7-1A0A0G2JEV5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav7-1A0A0G2JEV5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Trav7-1A0A0G2JEV5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav7-1A0A0G2JEV5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Trav7-1A0A0G2JEV5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trav7-1A0A0G2JEV5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav7-1A0A0G2JEV5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav7-1A0A0G2JEV5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trav7-1A0A0G2JEV5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav7-1A0A0G2JEV5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav7-1A0A0G2JEV5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav7-1A0A0G2JEV5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav7-1A0A0G2JEV5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav7-1A0A0G2JEV5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.64■□□□□ 0.89
Trav7-1A0A0G2JEV5 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.6■□□□□ 0.89
Trav7-1A0A0G2JEV5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.58■□□□□ 0.89
Trav7-1A0A0G2JEV5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav7-1A0A0G2JEV5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Trav7-1A0A0G2JEV5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav7-1A0A0G2JEV5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.52■□□□□ 0.88
Trav7-1A0A0G2JEV5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav7-1A0A0G2JEV5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav7-1A0A0G2JEV5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav7-1A0A0G2JEV5 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.48■□□□□ 0.87
Trav7-1A0A0G2JEV5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Trav7-1A0A0G2JEV5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trav7-1A0A0G2JEV5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav7-1A0A0G2JEV5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav7-1A0A0G2JEV5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav7-1A0A0G2JEV5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav7-1A0A0G2JEV5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.43■□□□□ 0.86
Trav7-1A0A0G2JEV5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav7-1A0A0G2JEV5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav7-1A0A0G2JEV5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav7-1A0A0G2JEV5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav7-1A0A0G2JEV5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.37■□□□□ 0.85
Trav7-1A0A0G2JEV5 Rab21-202ENSMUST00000218831 843 ntBASIC20.37■□□□□ 0.85
Trav7-1A0A0G2JEV5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.37■□□□□ 0.85
Trav7-1A0A0G2JEV5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav7-1A0A0G2JEV5 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.34■□□□□ 0.85
Trav7-1A0A0G2JEV5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trav7-1A0A0G2JEV5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.34■□□□□ 0.85
Trav7-1A0A0G2JEV5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav7-1A0A0G2JEV5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.32■□□□□ 0.84
Trav7-1A0A0G2JEV5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav7-1A0A0G2JEV5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav7-1A0A0G2JEV5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.29■□□□□ 0.84
Trav7-1A0A0G2JEV5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav7-1A0A0G2JEV5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav7-1A0A0G2JEV5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav7-1A0A0G2JEV5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav7-1A0A0G2JEV5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav7-1A0A0G2JEV5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav7-1A0A0G2JEV5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav7-1A0A0G2JEV5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav7-1A0A0G2JEV5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.22■□□□□ 0.83
Trav7-1A0A0G2JEV5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav7-1A0A0G2JEV5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trav7-1A0A0G2JEV5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.21■□□□□ 0.83
Trav7-1A0A0G2JEV5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trav7-1A0A0G2JEV5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav7-1A0A0G2JEV5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav7-1A0A0G2JEV5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav7-1A0A0G2JEV5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav7-1A0A0G2JEV5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav7-1A0A0G2JEV5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav7-1A0A0G2JEV5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav7-1A0A0G2JEV5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trav7-1A0A0G2JEV5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.09■□□□□ 0.81
Trav7-1A0A0G2JEV5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav7-1A0A0G2JEV5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav7-1A0A0G2JEV5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav7-1A0A0G2JEV5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trav7-1A0A0G2JEV5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.05■□□□□ 0.8
Trav7-1A0A0G2JEV5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Trav7-1A0A0G2JEV5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav7-1A0A0G2JEV5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav7-1A0A0G2JEV5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav7-1A0A0G2JEV5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav7-1A0A0G2JEV5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav7-1A0A0G2JEV5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms