Protein–RNA interactions for Protein: A0A0A6YYE5

Igkv4-78, Immunoglobulin kappa variable 4-78 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-78A0A0A6YYE5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Igkv4-78A0A0A6YYE5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Igkv4-78A0A0A6YYE5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.23■□□□□ 0.67
Igkv4-78A0A0A6YYE5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv4-78A0A0A6YYE5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv4-78A0A0A6YYE5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.19■□□□□ 0.66
Igkv4-78A0A0A6YYE5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv4-78A0A0A6YYE5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv4-78A0A0A6YYE5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.12■□□□□ 0.65
Igkv4-78A0A0A6YYE5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv4-78A0A0A6YYE5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv4-78A0A0A6YYE5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Igkv4-78A0A0A6YYE5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv4-78A0A0A6YYE5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv4-78A0A0A6YYE5 Gm25238-201ENSMUST00000174914 89 ntBASIC19.03■□□□□ 0.64
Igkv4-78A0A0A6YYE5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv4-78A0A0A6YYE5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Igkv4-78A0A0A6YYE5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Igkv4-78A0A0A6YYE5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv4-78A0A0A6YYE5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.99■□□□□ 0.63
Igkv4-78A0A0A6YYE5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.98■□□□□ 0.63
Igkv4-78A0A0A6YYE5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.97■□□□□ 0.63
Igkv4-78A0A0A6YYE5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv4-78A0A0A6YYE5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv4-78A0A0A6YYE5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv4-78A0A0A6YYE5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.94■□□□□ 0.62
Igkv4-78A0A0A6YYE5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv4-78A0A0A6YYE5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv4-78A0A0A6YYE5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Igkv4-78A0A0A6YYE5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Igkv4-78A0A0A6YYE5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Igkv4-78A0A0A6YYE5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv4-78A0A0A6YYE5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv4-78A0A0A6YYE5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv4-78A0A0A6YYE5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv4-78A0A0A6YYE5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv4-78A0A0A6YYE5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.79■□□□□ 0.6
Igkv4-78A0A0A6YYE5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.78■□□□□ 0.6
Igkv4-78A0A0A6YYE5 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.76■□□□□ 0.59
Igkv4-78A0A0A6YYE5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Igkv4-78A0A0A6YYE5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Igkv4-78A0A0A6YYE5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.69■□□□□ 0.58
Igkv4-78A0A0A6YYE5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Igkv4-78A0A0A6YYE5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igkv4-78A0A0A6YYE5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igkv4-78A0A0A6YYE5 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.66■□□□□ 0.58
Igkv4-78A0A0A6YYE5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv4-78A0A0A6YYE5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv4-78A0A0A6YYE5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.63■□□□□ 0.57
Igkv4-78A0A0A6YYE5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv4-78A0A0A6YYE5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv4-78A0A0A6YYE5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv4-78A0A0A6YYE5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv4-78A0A0A6YYE5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv4-78A0A0A6YYE5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.6■□□□□ 0.57
Igkv4-78A0A0A6YYE5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv4-78A0A0A6YYE5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv4-78A0A0A6YYE5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv4-78A0A0A6YYE5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv4-78A0A0A6YYE5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv4-78A0A0A6YYE5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Igkv4-78A0A0A6YYE5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Igkv4-78A0A0A6YYE5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.55■□□□□ 0.56
Igkv4-78A0A0A6YYE5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.55■□□□□ 0.56
Igkv4-78A0A0A6YYE5 Rab21-202ENSMUST00000218831 843 ntBASIC18.54■□□□□ 0.56
Igkv4-78A0A0A6YYE5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Igkv4-78A0A0A6YYE5 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.52■□□□□ 0.56
Igkv4-78A0A0A6YYE5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.52■□□□□ 0.56
Igkv4-78A0A0A6YYE5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv4-78A0A0A6YYE5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.5■□□□□ 0.55
Igkv4-78A0A0A6YYE5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv4-78A0A0A6YYE5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv4-78A0A0A6YYE5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv4-78A0A0A6YYE5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.47■□□□□ 0.55
Igkv4-78A0A0A6YYE5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Igkv4-78A0A0A6YYE5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv4-78A0A0A6YYE5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv4-78A0A0A6YYE5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv4-78A0A0A6YYE5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv4-78A0A0A6YYE5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.42■□□□□ 0.54
Igkv4-78A0A0A6YYE5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv4-78A0A0A6YYE5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv4-78A0A0A6YYE5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv4-78A0A0A6YYE5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Igkv4-78A0A0A6YYE5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.39■□□□□ 0.53
Igkv4-78A0A0A6YYE5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Igkv4-78A0A0A6YYE5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv4-78A0A0A6YYE5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv4-78A0A0A6YYE5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv4-78A0A0A6YYE5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv4-78A0A0A6YYE5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv4-78A0A0A6YYE5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv4-78A0A0A6YYE5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv4-78A0A0A6YYE5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Igkv4-78A0A0A6YYE5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv4-78A0A0A6YYE5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv4-78A0A0A6YYE5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Igkv4-78A0A0A6YYE5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv4-78A0A0A6YYE5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.28■□□□□ 0.52
Igkv4-78A0A0A6YYE5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms