Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Gm25238-201ENSMUST00000174914 89 ntBASIC18.3■□□□□ 0.52
Ighv1-56A0A0A6YXG2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-56A0A0A6YXG2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-56A0A0A6YXG2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.29■□□□□ 0.52
Ighv1-56A0A0A6YXG2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ighv1-56A0A0A6YXG2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.28■□□□□ 0.52
Ighv1-56A0A0A6YXG2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.26■□□□□ 0.51
Ighv1-56A0A0A6YXG2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.25■□□□□ 0.51
Ighv1-56A0A0A6YXG2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-56A0A0A6YXG2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Ighv1-56A0A0A6YXG2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Ighv1-56A0A0A6YXG2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.18■□□□□ 0.5
Ighv1-56A0A0A6YXG2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-56A0A0A6YXG2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-56A0A0A6YXG2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-56A0A0A6YXG2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-56A0A0A6YXG2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-56A0A0A6YXG2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-56A0A0A6YXG2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ighv1-56A0A0A6YXG2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-56A0A0A6YXG2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-56A0A0A6YXG2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.08■□□□□ 0.48
Ighv1-56A0A0A6YXG2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.05■□□□□ 0.48
Ighv1-56A0A0A6YXG2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-56A0A0A6YXG2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.03■□□□□ 0.48
Ighv1-56A0A0A6YXG2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-56A0A0A6YXG2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-56A0A0A6YXG2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-56A0A0A6YXG2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Ighv1-56A0A0A6YXG2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18■□□□□ 0.47
Ighv1-56A0A0A6YXG2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-56A0A0A6YXG2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-56A0A0A6YXG2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-56A0A0A6YXG2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.97■□□□□ 0.47
Ighv1-56A0A0A6YXG2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-56A0A0A6YXG2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-56A0A0A6YXG2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-56A0A0A6YXG2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ighv1-56A0A0A6YXG2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-56A0A0A6YXG2 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.89■□□□□ 0.45
Ighv1-56A0A0A6YXG2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ighv1-56A0A0A6YXG2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-56A0A0A6YXG2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.88■□□□□ 0.45
Ighv1-56A0A0A6YXG2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ighv1-56A0A0A6YXG2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-56A0A0A6YXG2 Rab21-202ENSMUST00000218831 843 ntBASIC17.83■□□□□ 0.44
Ighv1-56A0A0A6YXG2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-56A0A0A6YXG2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-56A0A0A6YXG2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-56A0A0A6YXG2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-56A0A0A6YXG2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-56A0A0A6YXG2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-56A0A0A6YXG2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-56A0A0A6YXG2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.73■□□□□ 0.43
Ighv1-56A0A0A6YXG2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.72■□□□□ 0.43
Ighv1-56A0A0A6YXG2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-56A0A0A6YXG2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-56A0A0A6YXG2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-56A0A0A6YXG2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.71■□□□□ 0.43
Ighv1-56A0A0A6YXG2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.7■□□□□ 0.42
Ighv1-56A0A0A6YXG2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-56A0A0A6YXG2 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.69■□□□□ 0.42
Ighv1-56A0A0A6YXG2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-56A0A0A6YXG2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-56A0A0A6YXG2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-56A0A0A6YXG2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Ighv1-56A0A0A6YXG2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-56A0A0A6YXG2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-56A0A0A6YXG2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.65■□□□□ 0.42
Ighv1-56A0A0A6YXG2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ighv1-56A0A0A6YXG2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ighv1-56A0A0A6YXG2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-56A0A0A6YXG2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-56A0A0A6YXG2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-56A0A0A6YXG2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-56A0A0A6YXG2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-56A0A0A6YXG2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-56A0A0A6YXG2 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.58■□□□□ 0.41
Ighv1-56A0A0A6YXG2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Ighv1-56A0A0A6YXG2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-56A0A0A6YXG2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-56A0A0A6YXG2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-56A0A0A6YXG2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-56A0A0A6YXG2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.54■□□□□ 0.4
Ighv1-56A0A0A6YXG2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-56A0A0A6YXG2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.52■□□□□ 0.4
Ighv1-56A0A0A6YXG2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-56A0A0A6YXG2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-56A0A0A6YXG2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-56A0A0A6YXG2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-56A0A0A6YXG2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-56A0A0A6YXG2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ighv1-56A0A0A6YXG2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-56A0A0A6YXG2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-56A0A0A6YXG2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-56A0A0A6YXG2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-56A0A0A6YXG2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-56A0A0A6YXG2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-56A0A0A6YXG2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-56A0A0A6YXG2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms