Protein–RNA interactions for Protein: A0A0A6YXE0

Ighv1-59, Immunoglobulin heavy variable V1-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-59A0A0A6YXE0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ighv1-59A0A0A6YXE0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-59A0A0A6YXE0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv1-59A0A0A6YXE0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ighv1-59A0A0A6YXE0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ighv1-59A0A0A6YXE0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-59A0A0A6YXE0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.46■□□□□ 0.71
Ighv1-59A0A0A6YXE0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-59A0A0A6YXE0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ighv1-59A0A0A6YXE0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.44■□□□□ 0.7
Ighv1-59A0A0A6YXE0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-59A0A0A6YXE0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-59A0A0A6YXE0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-59A0A0A6YXE0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.4■□□□□ 0.7
Ighv1-59A0A0A6YXE0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ighv1-59A0A0A6YXE0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv1-59A0A0A6YXE0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ighv1-59A0A0A6YXE0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-59A0A0A6YXE0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-59A0A0A6YXE0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-59A0A0A6YXE0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-59A0A0A6YXE0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-59A0A0A6YXE0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-59A0A0A6YXE0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-59A0A0A6YXE0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ighv1-59A0A0A6YXE0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-59A0A0A6YXE0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.2■□□□□ 0.66
Ighv1-59A0A0A6YXE0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-59A0A0A6YXE0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-59A0A0A6YXE0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.14■□□□□ 0.65
Ighv1-59A0A0A6YXE0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.14■□□□□ 0.65
Ighv1-59A0A0A6YXE0 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.12■□□□□ 0.65
Ighv1-59A0A0A6YXE0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.12■□□□□ 0.65
Ighv1-59A0A0A6YXE0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-59A0A0A6YXE0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ighv1-59A0A0A6YXE0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-59A0A0A6YXE0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-59A0A0A6YXE0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-59A0A0A6YXE0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-59A0A0A6YXE0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-59A0A0A6YXE0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-59A0A0A6YXE0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-59A0A0A6YXE0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-59A0A0A6YXE0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-59A0A0A6YXE0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.03■□□□□ 0.64
Ighv1-59A0A0A6YXE0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-59A0A0A6YXE0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ighv1-59A0A0A6YXE0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ighv1-59A0A0A6YXE0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv1-59A0A0A6YXE0 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.94■□□□□ 0.62
Ighv1-59A0A0A6YXE0 Gm26115-201ENSMUST00000175605 87 ntBASIC18.94■□□□□ 0.62
Ighv1-59A0A0A6YXE0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-59A0A0A6YXE0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-59A0A0A6YXE0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-59A0A0A6YXE0 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.93■□□□□ 0.62
Ighv1-59A0A0A6YXE0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-59A0A0A6YXE0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-59A0A0A6YXE0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ighv1-59A0A0A6YXE0 Gm27322-201ENSMUST00000184007 104 ntBASIC18.9■□□□□ 0.62
Ighv1-59A0A0A6YXE0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ighv1-59A0A0A6YXE0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-59A0A0A6YXE0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-59A0A0A6YXE0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-59A0A0A6YXE0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.86■□□□□ 0.61
Ighv1-59A0A0A6YXE0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-59A0A0A6YXE0 Gm8109-201ENSMUST00000194076 746 ntBASIC18.85■□□□□ 0.61
Ighv1-59A0A0A6YXE0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-59A0A0A6YXE0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-59A0A0A6YXE0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Ighv1-59A0A0A6YXE0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv1-59A0A0A6YXE0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-59A0A0A6YXE0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-59A0A0A6YXE0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-59A0A0A6YXE0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-59A0A0A6YXE0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ighv1-59A0A0A6YXE0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ighv1-59A0A0A6YXE0 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.72■□□□□ 0.59
Ighv1-59A0A0A6YXE0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-59A0A0A6YXE0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-59A0A0A6YXE0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ighv1-59A0A0A6YXE0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.7■□□□□ 0.58
Ighv1-59A0A0A6YXE0 Mipep-204ENSMUST00000225043 1548 ntBASIC18.69■□□□□ 0.58
Ighv1-59A0A0A6YXE0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-59A0A0A6YXE0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ighv1-59A0A0A6YXE0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-59A0A0A6YXE0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ighv1-59A0A0A6YXE0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-59A0A0A6YXE0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-59A0A0A6YXE0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-59A0A0A6YXE0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-59A0A0A6YXE0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-59A0A0A6YXE0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-59A0A0A6YXE0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.52■□□□□ 0.56
Ighv1-59A0A0A6YXE0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-59A0A0A6YXE0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-59A0A0A6YXE0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-59A0A0A6YXE0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-59A0A0A6YXE0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-59A0A0A6YXE0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-59A0A0A6YXE0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms