Protein–RNA interactions for Protein: A0A0A6YWS9

Ighv6-5, Immunoglobulin heavy variable V6-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-5A0A0A6YWS9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.87■■□□□ 1.25
Ighv6-5A0A0A6YWS9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Ighv6-5A0A0A6YWS9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ighv6-5A0A0A6YWS9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Ighv6-5A0A0A6YWS9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Ighv6-5A0A0A6YWS9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ighv6-5A0A0A6YWS9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ighv6-5A0A0A6YWS9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ighv6-5A0A0A6YWS9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.71■■□□□ 1.23
Ighv6-5A0A0A6YWS9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ighv6-5A0A0A6YWS9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ighv6-5A0A0A6YWS9 Gm25262-201ENSMUST00000174934 133 ntBASIC22.68■■□□□ 1.22
Ighv6-5A0A0A6YWS9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ighv6-5A0A0A6YWS9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ighv6-5A0A0A6YWS9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ighv6-5A0A0A6YWS9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
Ighv6-5A0A0A6YWS9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ighv6-5A0A0A6YWS9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Ighv6-5A0A0A6YWS9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ighv6-5A0A0A6YWS9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.63■■□□□ 1.21
Ighv6-5A0A0A6YWS9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ighv6-5A0A0A6YWS9 Rab21-202ENSMUST00000218831 843 ntBASIC22.62■■□□□ 1.21
Ighv6-5A0A0A6YWS9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ighv6-5A0A0A6YWS9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ighv6-5A0A0A6YWS9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.55■■□□□ 1.2
Ighv6-5A0A0A6YWS9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ighv6-5A0A0A6YWS9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.53■■□□□ 1.2
Ighv6-5A0A0A6YWS9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ighv6-5A0A0A6YWS9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ighv6-5A0A0A6YWS9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.48■■□□□ 1.19
Ighv6-5A0A0A6YWS9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ighv6-5A0A0A6YWS9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ighv6-5A0A0A6YWS9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.37■■□□□ 1.17
Ighv6-5A0A0A6YWS9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ighv6-5A0A0A6YWS9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Ighv6-5A0A0A6YWS9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ighv6-5A0A0A6YWS9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.33■■□□□ 1.17
Ighv6-5A0A0A6YWS9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ighv6-5A0A0A6YWS9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ighv6-5A0A0A6YWS9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.29■■□□□ 1.16
Ighv6-5A0A0A6YWS9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ighv6-5A0A0A6YWS9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Ighv6-5A0A0A6YWS9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.28■■□□□ 1.16
Ighv6-5A0A0A6YWS9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ighv6-5A0A0A6YWS9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ighv6-5A0A0A6YWS9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.22■■□□□ 1.15
Ighv6-5A0A0A6YWS9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ighv6-5A0A0A6YWS9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Ighv6-5A0A0A6YWS9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ighv6-5A0A0A6YWS9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Ighv6-5A0A0A6YWS9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ighv6-5A0A0A6YWS9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ighv6-5A0A0A6YWS9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.1■■□□□ 1.13
Ighv6-5A0A0A6YWS9 Gm26115-201ENSMUST00000175605 87 ntBASIC22.09■■□□□ 1.13
Ighv6-5A0A0A6YWS9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ighv6-5A0A0A6YWS9 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.06■■□□□ 1.12
Ighv6-5A0A0A6YWS9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ighv6-5A0A0A6YWS9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ighv6-5A0A0A6YWS9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ighv6-5A0A0A6YWS9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.04■■□□□ 1.12
Ighv6-5A0A0A6YWS9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ighv6-5A0A0A6YWS9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ighv6-5A0A0A6YWS9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.02■■□□□ 1.12
Ighv6-5A0A0A6YWS9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.01■■□□□ 1.11
Ighv6-5A0A0A6YWS9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv6-5A0A0A6YWS9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv6-5A0A0A6YWS9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22■■□□□ 1.11
Ighv6-5A0A0A6YWS9 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.99■■□□□ 1.11
Ighv6-5A0A0A6YWS9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ighv6-5A0A0A6YWS9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv6-5A0A0A6YWS9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv6-5A0A0A6YWS9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ighv6-5A0A0A6YWS9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ighv6-5A0A0A6YWS9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ighv6-5A0A0A6YWS9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ighv6-5A0A0A6YWS9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ighv6-5A0A0A6YWS9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv6-5A0A0A6YWS9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ighv6-5A0A0A6YWS9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ighv6-5A0A0A6YWS9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ighv6-5A0A0A6YWS9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ighv6-5A0A0A6YWS9 Gm8109-201ENSMUST00000194076 746 ntBASIC21.88■■□□□ 1.09
Ighv6-5A0A0A6YWS9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ighv6-5A0A0A6YWS9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Ighv6-5A0A0A6YWS9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.86■■□□□ 1.09
Ighv6-5A0A0A6YWS9 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.86■■□□□ 1.09
Ighv6-5A0A0A6YWS9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ighv6-5A0A0A6YWS9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ighv6-5A0A0A6YWS9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ighv6-5A0A0A6YWS9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv6-5A0A0A6YWS9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ighv6-5A0A0A6YWS9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ighv6-5A0A0A6YWS9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ighv6-5A0A0A6YWS9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ighv6-5A0A0A6YWS9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ighv6-5A0A0A6YWS9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
Ighv6-5A0A0A6YWS9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ighv6-5A0A0A6YWS9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv6-5A0A0A6YWS9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Ighv6-5A0A0A6YWS9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms