Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav21-dv12A0A075B6C4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trav21-dv12A0A075B6C4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.02■□□□□ 0.96
Trav21-dv12A0A075B6C4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.01■□□□□ 0.95
Trav21-dv12A0A075B6C4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav21-dv12A0A075B6C4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trav21-dv12A0A075B6C4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.95■□□□□ 0.94
Trav21-dv12A0A075B6C4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav21-dv12A0A075B6C4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.84■□□□□ 0.93
Trav21-dv12A0A075B6C4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav21-dv12A0A075B6C4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav21-dv12A0A075B6C4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav21-dv12A0A075B6C4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.79■□□□□ 0.92
Trav21-dv12A0A075B6C4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trav21-dv12A0A075B6C4 Rab21-202ENSMUST00000218831 843 ntBASIC20.75■□□□□ 0.91
Trav21-dv12A0A075B6C4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav21-dv12A0A075B6C4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav21-dv12A0A075B6C4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav21-dv12A0A075B6C4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav21-dv12A0A075B6C4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.66■□□□□ 0.9
Trav21-dv12A0A075B6C4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trav21-dv12A0A075B6C4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Trav21-dv12A0A075B6C4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trav21-dv12A0A075B6C4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav21-dv12A0A075B6C4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav21-dv12A0A075B6C4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav21-dv12A0A075B6C4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.63■□□□□ 0.89
Trav21-dv12A0A075B6C4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav21-dv12A0A075B6C4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav21-dv12A0A075B6C4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trav21-dv12A0A075B6C4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav21-dv12A0A075B6C4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav21-dv12A0A075B6C4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Trav21-dv12A0A075B6C4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.55■□□□□ 0.88
Trav21-dv12A0A075B6C4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.55■□□□□ 0.88
Trav21-dv12A0A075B6C4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav21-dv12A0A075B6C4 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.52■□□□□ 0.88
Trav21-dv12A0A075B6C4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trav21-dv12A0A075B6C4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Trav21-dv12A0A075B6C4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav21-dv12A0A075B6C4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav21-dv12A0A075B6C4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav21-dv12A0A075B6C4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trav21-dv12A0A075B6C4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav21-dv12A0A075B6C4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav21-dv12A0A075B6C4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.44■□□□□ 0.86
Trav21-dv12A0A075B6C4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav21-dv12A0A075B6C4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.41■□□□□ 0.86
Trav21-dv12A0A075B6C4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trav21-dv12A0A075B6C4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav21-dv12A0A075B6C4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav21-dv12A0A075B6C4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav21-dv12A0A075B6C4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav21-dv12A0A075B6C4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.35■□□□□ 0.85
Trav21-dv12A0A075B6C4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav21-dv12A0A075B6C4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav21-dv12A0A075B6C4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav21-dv12A0A075B6C4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav21-dv12A0A075B6C4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav21-dv12A0A075B6C4 Gm25262-201ENSMUST00000174934 133 ntBASIC20.31■□□□□ 0.84
Trav21-dv12A0A075B6C4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav21-dv12A0A075B6C4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trav21-dv12A0A075B6C4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Trav21-dv12A0A075B6C4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav21-dv12A0A075B6C4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav21-dv12A0A075B6C4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trav21-dv12A0A075B6C4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav21-dv12A0A075B6C4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav21-dv12A0A075B6C4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav21-dv12A0A075B6C4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav21-dv12A0A075B6C4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav21-dv12A0A075B6C4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trav21-dv12A0A075B6C4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav21-dv12A0A075B6C4 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.11■□□□□ 0.81
Trav21-dv12A0A075B6C4 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.11■□□□□ 0.81
Trav21-dv12A0A075B6C4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav21-dv12A0A075B6C4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav21-dv12A0A075B6C4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav21-dv12A0A075B6C4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trav21-dv12A0A075B6C4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trav21-dv12A0A075B6C4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trav21-dv12A0A075B6C4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav21-dv12A0A075B6C4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.02■□□□□ 0.8
Trav21-dv12A0A075B6C4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav21-dv12A0A075B6C4 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.99■□□□□ 0.79
Trav21-dv12A0A075B6C4 Mipep-204ENSMUST00000225043 1548 ntBASIC19.98■□□□□ 0.79
Trav21-dv12A0A075B6C4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav21-dv12A0A075B6C4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav21-dv12A0A075B6C4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.97■□□□□ 0.79
Trav21-dv12A0A075B6C4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav21-dv12A0A075B6C4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav21-dv12A0A075B6C4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav21-dv12A0A075B6C4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav21-dv12A0A075B6C4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.92■□□□□ 0.78
Trav21-dv12A0A075B6C4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav21-dv12A0A075B6C4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav21-dv12A0A075B6C4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav21-dv12A0A075B6C4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trav21-dv12A0A075B6C4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trav21-dv12A0A075B6C4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms