Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav16A0A075B653 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav16A0A075B653 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav16A0A075B653 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav16A0A075B653 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav16A0A075B653 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav16A0A075B653 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav16A0A075B653 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav16A0A075B653 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.82■□□□□ 0.92
Trav16A0A075B653 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav16A0A075B653 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav16A0A075B653 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trav16A0A075B653 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav16A0A075B653 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav16A0A075B653 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav16A0A075B653 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.65■□□□□ 0.9
Trav16A0A075B653 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav16A0A075B653 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav16A0A075B653 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav16A0A075B653 Zxda-201ENSMUST00000117281 2621 ntBASIC20.62■□□□□ 0.89
Trav16A0A075B653 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trav16A0A075B653 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav16A0A075B653 Gm27325-201ENSMUST00000175467 74 ntBASIC20.56■□□□□ 0.88
Trav16A0A075B653 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav16A0A075B653 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trav16A0A075B653 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav16A0A075B653 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Trav16A0A075B653 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav16A0A075B653 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav16A0A075B653 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.49■□□□□ 0.87
Trav16A0A075B653 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav16A0A075B653 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trav16A0A075B653 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.44■□□□□ 0.86
Trav16A0A075B653 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trav16A0A075B653 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav16A0A075B653 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav16A0A075B653 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav16A0A075B653 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav16A0A075B653 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav16A0A075B653 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav16A0A075B653 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav16A0A075B653 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav16A0A075B653 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trav16A0A075B653 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav16A0A075B653 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.3■□□□□ 0.84
Trav16A0A075B653 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav16A0A075B653 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav16A0A075B653 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav16A0A075B653 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.27■□□□□ 0.84
Trav16A0A075B653 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav16A0A075B653 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav16A0A075B653 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.23■□□□□ 0.83
Trav16A0A075B653 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav16A0A075B653 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trav16A0A075B653 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav16A0A075B653 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.19■□□□□ 0.82
Trav16A0A075B653 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav16A0A075B653 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav16A0A075B653 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trav16A0A075B653 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trav16A0A075B653 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav16A0A075B653 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.15■□□□□ 0.82
Trav16A0A075B653 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav16A0A075B653 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.14■□□□□ 0.81
Trav16A0A075B653 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav16A0A075B653 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav16A0A075B653 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav16A0A075B653 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trav16A0A075B653 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav16A0A075B653 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav16A0A075B653 Gm25238-201ENSMUST00000174914 89 ntBASIC20.07■□□□□ 0.8
Trav16A0A075B653 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.07■□□□□ 0.8
Trav16A0A075B653 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.06■□□□□ 0.8
Trav16A0A075B653 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trav16A0A075B653 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav16A0A075B653 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav16A0A075B653 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav16A0A075B653 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav16A0A075B653 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav16A0A075B653 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.02■□□□□ 0.8
Trav16A0A075B653 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav16A0A075B653 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trav16A0A075B653 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Trav16A0A075B653 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav16A0A075B653 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav16A0A075B653 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trav16A0A075B653 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav16A0A075B653 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav16A0A075B653 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.96■□□□□ 0.79
Trav16A0A075B653 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trav16A0A075B653 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav16A0A075B653 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav16A0A075B653 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.93■□□□□ 0.78
Trav16A0A075B653 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.91■□□□□ 0.78
Trav16A0A075B653 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav16A0A075B653 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav16A0A075B653 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav16A0A075B653 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav16A0A075B653 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.9■□□□□ 0.78
Trav16A0A075B653 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms