Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trav5-4A0A075B652 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trav5-4A0A075B652 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trav5-4A0A075B652 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.74■■□□□ 1.23
Trav5-4A0A075B652 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.7■■□□□ 1.22
Trav5-4A0A075B652 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trav5-4A0A075B652 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Trav5-4A0A075B652 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.6■■□□□ 1.21
Trav5-4A0A075B652 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trav5-4A0A075B652 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trav5-4A0A075B652 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.53■■□□□ 1.2
Trav5-4A0A075B652 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trav5-4A0A075B652 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Trav5-4A0A075B652 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trav5-4A0A075B652 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trav5-4A0A075B652 Rab21-202ENSMUST00000218831 843 ntBASIC22.48■■□□□ 1.19
Trav5-4A0A075B652 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trav5-4A0A075B652 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trav5-4A0A075B652 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trav5-4A0A075B652 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trav5-4A0A075B652 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trav5-4A0A075B652 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.37■■□□□ 1.17
Trav5-4A0A075B652 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trav5-4A0A075B652 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trav5-4A0A075B652 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trav5-4A0A075B652 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.35■■□□□ 1.17
Trav5-4A0A075B652 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trav5-4A0A075B652 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trav5-4A0A075B652 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Trav5-4A0A075B652 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trav5-4A0A075B652 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trav5-4A0A075B652 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Trav5-4A0A075B652 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trav5-4A0A075B652 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Trav5-4A0A075B652 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.25■■□□□ 1.15
Trav5-4A0A075B652 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trav5-4A0A075B652 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.25■■□□□ 1.15
Trav5-4A0A075B652 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.22■■□□□ 1.15
Trav5-4A0A075B652 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trav5-4A0A075B652 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trav5-4A0A075B652 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trav5-4A0A075B652 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trav5-4A0A075B652 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trav5-4A0A075B652 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Trav5-4A0A075B652 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trav5-4A0A075B652 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trav5-4A0A075B652 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.14■■□□□ 1.13
Trav5-4A0A075B652 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trav5-4A0A075B652 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Trav5-4A0A075B652 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Trav5-4A0A075B652 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trav5-4A0A075B652 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Trav5-4A0A075B652 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.07■■□□□ 1.12
Trav5-4A0A075B652 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav5-4A0A075B652 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trav5-4A0A075B652 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trav5-4A0A075B652 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trav5-4A0A075B652 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trav5-4A0A075B652 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trav5-4A0A075B652 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.03■■□□□ 1.12
Trav5-4A0A075B652 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trav5-4A0A075B652 Gm25262-201ENSMUST00000174934 133 ntBASIC22■■□□□ 1.11
Trav5-4A0A075B652 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trav5-4A0A075B652 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trav5-4A0A075B652 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Trav5-4A0A075B652 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trav5-4A0A075B652 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trav5-4A0A075B652 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trav5-4A0A075B652 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trav5-4A0A075B652 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trav5-4A0A075B652 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trav5-4A0A075B652 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trav5-4A0A075B652 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trav5-4A0A075B652 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trav5-4A0A075B652 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.77■■□□□ 1.08
Trav5-4A0A075B652 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Trav5-4A0A075B652 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav5-4A0A075B652 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.76■■□□□ 1.07
Trav5-4A0A075B652 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trav5-4A0A075B652 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trav5-4A0A075B652 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Trav5-4A0A075B652 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trav5-4A0A075B652 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.67■■□□□ 1.06
Trav5-4A0A075B652 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav5-4A0A075B652 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav5-4A0A075B652 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav5-4A0A075B652 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.65■■□□□ 1.06
Trav5-4A0A075B652 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav5-4A0A075B652 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav5-4A0A075B652 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav5-4A0A075B652 Mipep-204ENSMUST00000225043 1548 ntBASIC21.63■■□□□ 1.05
Trav5-4A0A075B652 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav5-4A0A075B652 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.62■■□□□ 1.05
Trav5-4A0A075B652 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav5-4A0A075B652 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trav5-4A0A075B652 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav5-4A0A075B652 Zxda-201ENSMUST00000117281 2621 ntBASIC21.57■■□□□ 1.04
Trav5-4A0A075B652 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trav5-4A0A075B652 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.56■■□□□ 1.04
Trav5-4A0A075B652 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms