Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.37■■□□□ 1.01
Trav4-4-dv10A0A075B651 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav4-4-dv10A0A075B651 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav4-4-dv10A0A075B651 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trav4-4-dv10A0A075B651 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trav4-4-dv10A0A075B651 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trav4-4-dv10A0A075B651 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trav4-4-dv10A0A075B651 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav4-4-dv10A0A075B651 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trav4-4-dv10A0A075B651 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav4-4-dv10A0A075B651 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav4-4-dv10A0A075B651 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.2■□□□□ 0.98
Trav4-4-dv10A0A075B651 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trav4-4-dv10A0A075B651 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav4-4-dv10A0A075B651 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav4-4-dv10A0A075B651 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav4-4-dv10A0A075B651 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav4-4-dv10A0A075B651 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav4-4-dv10A0A075B651 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trav4-4-dv10A0A075B651 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.1■□□□□ 0.97
Trav4-4-dv10A0A075B651 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.09■□□□□ 0.97
Trav4-4-dv10A0A075B651 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav4-4-dv10A0A075B651 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav4-4-dv10A0A075B651 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.02■□□□□ 0.96
Trav4-4-dv10A0A075B651 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Trav4-4-dv10A0A075B651 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav4-4-dv10A0A075B651 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav4-4-dv10A0A075B651 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav4-4-dv10A0A075B651 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav4-4-dv10A0A075B651 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav4-4-dv10A0A075B651 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav4-4-dv10A0A075B651 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav4-4-dv10A0A075B651 Gm25238-201ENSMUST00000174914 89 ntBASIC20.94■□□□□ 0.94
Trav4-4-dv10A0A075B651 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.91■□□□□ 0.94
Trav4-4-dv10A0A075B651 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.91■□□□□ 0.94
Trav4-4-dv10A0A075B651 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav4-4-dv10A0A075B651 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.88■□□□□ 0.93
Trav4-4-dv10A0A075B651 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.88■□□□□ 0.93
Trav4-4-dv10A0A075B651 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.87■□□□□ 0.93
Trav4-4-dv10A0A075B651 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trav4-4-dv10A0A075B651 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav4-4-dv10A0A075B651 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav4-4-dv10A0A075B651 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav4-4-dv10A0A075B651 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav4-4-dv10A0A075B651 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav4-4-dv10A0A075B651 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trav4-4-dv10A0A075B651 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav4-4-dv10A0A075B651 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.77■□□□□ 0.92
Trav4-4-dv10A0A075B651 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.75■□□□□ 0.91
Trav4-4-dv10A0A075B651 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Trav4-4-dv10A0A075B651 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trav4-4-dv10A0A075B651 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav4-4-dv10A0A075B651 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trav4-4-dv10A0A075B651 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.7■□□□□ 0.9
Trav4-4-dv10A0A075B651 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.7■□□□□ 0.9
Trav4-4-dv10A0A075B651 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.68■□□□□ 0.9
Trav4-4-dv10A0A075B651 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Trav4-4-dv10A0A075B651 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav4-4-dv10A0A075B651 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trav4-4-dv10A0A075B651 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav4-4-dv10A0A075B651 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav4-4-dv10A0A075B651 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav4-4-dv10A0A075B651 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav4-4-dv10A0A075B651 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav4-4-dv10A0A075B651 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.56■□□□□ 0.88
Trav4-4-dv10A0A075B651 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.54■□□□□ 0.88
Trav4-4-dv10A0A075B651 Rab21-202ENSMUST00000218831 843 ntBASIC20.54■□□□□ 0.88
Trav4-4-dv10A0A075B651 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav4-4-dv10A0A075B651 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav4-4-dv10A0A075B651 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav4-4-dv10A0A075B651 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trav4-4-dv10A0A075B651 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.52■□□□□ 0.88
Trav4-4-dv10A0A075B651 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.52■□□□□ 0.88
Trav4-4-dv10A0A075B651 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trav4-4-dv10A0A075B651 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav4-4-dv10A0A075B651 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Trav4-4-dv10A0A075B651 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav4-4-dv10A0A075B651 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav4-4-dv10A0A075B651 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.49■□□□□ 0.87
Trav4-4-dv10A0A075B651 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav4-4-dv10A0A075B651 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav4-4-dv10A0A075B651 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav4-4-dv10A0A075B651 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav4-4-dv10A0A075B651 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav4-4-dv10A0A075B651 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trav4-4-dv10A0A075B651 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav4-4-dv10A0A075B651 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav4-4-dv10A0A075B651 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav4-4-dv10A0A075B651 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav4-4-dv10A0A075B651 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trav4-4-dv10A0A075B651 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav4-4-dv10A0A075B651 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav4-4-dv10A0A075B651 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav4-4-dv10A0A075B651 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav4-4-dv10A0A075B651 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trav4-4-dv10A0A075B651 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.36■□□□□ 0.85
Trav4-4-dv10A0A075B651 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav4-4-dv10A0A075B651 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav4-4-dv10A0A075B651 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trav4-4-dv10A0A075B651 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms