Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13-2A0A075B649 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13-2A0A075B649 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13-2A0A075B649 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav13-2A0A075B649 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav13-2A0A075B649 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18■□□□□ 0.47
Trav13-2A0A075B649 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav13-2A0A075B649 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav13-2A0A075B649 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13-2A0A075B649 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13-2A0A075B649 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav13-2A0A075B649 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav13-2A0A075B649 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav13-2A0A075B649 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC17.96■□□□□ 0.47
Trav13-2A0A075B649 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav13-2A0A075B649 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trav13-2A0A075B649 Gm27325-201ENSMUST00000175467 74 ntBASIC17.93■□□□□ 0.46
Trav13-2A0A075B649 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav13-2A0A075B649 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13-2A0A075B649 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.85■□□□□ 0.45
Trav13-2A0A075B649 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13-2A0A075B649 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trav13-2A0A075B649 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav13-2A0A075B649 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13-2A0A075B649 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav13-2A0A075B649 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav13-2A0A075B649 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav13-2A0A075B649 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav13-2A0A075B649 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13-2A0A075B649 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav13-2A0A075B649 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.75■□□□□ 0.43
Trav13-2A0A075B649 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav13-2A0A075B649 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav13-2A0A075B649 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13-2A0A075B649 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trav13-2A0A075B649 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trav13-2A0A075B649 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13-2A0A075B649 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav13-2A0A075B649 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav13-2A0A075B649 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13-2A0A075B649 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13-2A0A075B649 Gm25238-201ENSMUST00000174914 89 ntBASIC17.66■□□□□ 0.42
Trav13-2A0A075B649 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13-2A0A075B649 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav13-2A0A075B649 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13-2A0A075B649 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.64■□□□□ 0.41
Trav13-2A0A075B649 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav13-2A0A075B649 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13-2A0A075B649 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.58■□□□□ 0.4
Trav13-2A0A075B649 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13-2A0A075B649 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.55■□□□□ 0.4
Trav13-2A0A075B649 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trav13-2A0A075B649 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.53■□□□□ 0.4
Trav13-2A0A075B649 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.52■□□□□ 0.4
Trav13-2A0A075B649 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav13-2A0A075B649 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13-2A0A075B649 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13-2A0A075B649 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13-2A0A075B649 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13-2A0A075B649 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13-2A0A075B649 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13-2A0A075B649 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav13-2A0A075B649 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13-2A0A075B649 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13-2A0A075B649 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13-2A0A075B649 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13-2A0A075B649 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13-2A0A075B649 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13-2A0A075B649 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13-2A0A075B649 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13-2A0A075B649 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13-2A0A075B649 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.4■□□□□ 0.38
Trav13-2A0A075B649 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13-2A0A075B649 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13-2A0A075B649 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav13-2A0A075B649 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13-2A0A075B649 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13-2A0A075B649 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13-2A0A075B649 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13-2A0A075B649 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13-2A0A075B649 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13-2A0A075B649 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13-2A0A075B649 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav13-2A0A075B649 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13-2A0A075B649 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13-2A0A075B649 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13-2A0A075B649 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13-2A0A075B649 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Trav13-2A0A075B649 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13-2A0A075B649 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Trav13-2A0A075B649 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13-2A0A075B649 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav13-2A0A075B649 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13-2A0A075B649 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav13-2A0A075B649 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13-2A0A075B649 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13-2A0A075B649 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13-2A0A075B649 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13-2A0A075B649 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13-2A0A075B649 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms