Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav8-1A0A075B641 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8-1A0A075B641 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav8-1A0A075B641 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trav8-1A0A075B641 Gm23366-201ENSMUST00000175022 89 ntBASIC19.21■□□□□ 0.67
Trav8-1A0A075B641 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8-1A0A075B641 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav8-1A0A075B641 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trav8-1A0A075B641 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8-1A0A075B641 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8-1A0A075B641 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8-1A0A075B641 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8-1A0A075B641 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav8-1A0A075B641 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav8-1A0A075B641 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8-1A0A075B641 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8-1A0A075B641 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8-1A0A075B641 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.11■□□□□ 0.65
Trav8-1A0A075B641 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav8-1A0A075B641 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav8-1A0A075B641 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav8-1A0A075B641 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav8-1A0A075B641 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav8-1A0A075B641 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trav8-1A0A075B641 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav8-1A0A075B641 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Trav8-1A0A075B641 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8-1A0A075B641 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trav8-1A0A075B641 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8-1A0A075B641 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8-1A0A075B641 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8-1A0A075B641 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trav8-1A0A075B641 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.94■□□□□ 0.62
Trav8-1A0A075B641 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trav8-1A0A075B641 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8-1A0A075B641 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8-1A0A075B641 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8-1A0A075B641 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8-1A0A075B641 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav8-1A0A075B641 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trav8-1A0A075B641 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trav8-1A0A075B641 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8-1A0A075B641 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.83■□□□□ 0.6
Trav8-1A0A075B641 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.79■□□□□ 0.6
Trav8-1A0A075B641 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Trav8-1A0A075B641 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav8-1A0A075B641 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8-1A0A075B641 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav8-1A0A075B641 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav8-1A0A075B641 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Trav8-1A0A075B641 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav8-1A0A075B641 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8-1A0A075B641 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav8-1A0A075B641 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav8-1A0A075B641 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trav8-1A0A075B641 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8-1A0A075B641 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav8-1A0A075B641 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav8-1A0A075B641 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8-1A0A075B641 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav8-1A0A075B641 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav8-1A0A075B641 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav8-1A0A075B641 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav8-1A0A075B641 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav8-1A0A075B641 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav8-1A0A075B641 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav8-1A0A075B641 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.57■□□□□ 0.56
Trav8-1A0A075B641 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav8-1A0A075B641 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.54■□□□□ 0.56
Trav8-1A0A075B641 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.53■□□□□ 0.56
Trav8-1A0A075B641 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav8-1A0A075B641 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav8-1A0A075B641 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trav8-1A0A075B641 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav8-1A0A075B641 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav8-1A0A075B641 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav8-1A0A075B641 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav8-1A0A075B641 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav8-1A0A075B641 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav8-1A0A075B641 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav8-1A0A075B641 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav8-1A0A075B641 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav8-1A0A075B641 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.47■□□□□ 0.55
Trav8-1A0A075B641 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav8-1A0A075B641 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.46■□□□□ 0.55
Trav8-1A0A075B641 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.45■□□□□ 0.54
Trav8-1A0A075B641 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8-1A0A075B641 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8-1A0A075B641 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8-1A0A075B641 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8-1A0A075B641 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8-1A0A075B641 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8-1A0A075B641 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8-1A0A075B641 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8-1A0A075B641 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8-1A0A075B641 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav8-1A0A075B641 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8-1A0A075B641 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8-1A0A075B641 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trav8-1A0A075B641 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms