Protein–RNA interactions for Protein: A0A075B5P1

Igkv3-1, Immunoglobulin kappa variable 3-1 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-1A0A075B5P1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv3-1A0A075B5P1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Igkv3-1A0A075B5P1 Rab21-202ENSMUST00000218831 843 ntBASIC18.87■□□□□ 0.61
Igkv3-1A0A075B5P1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Igkv3-1A0A075B5P1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv3-1A0A075B5P1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Igkv3-1A0A075B5P1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.8■□□□□ 0.6
Igkv3-1A0A075B5P1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Igkv3-1A0A075B5P1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv3-1A0A075B5P1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv3-1A0A075B5P1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv3-1A0A075B5P1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.77■□□□□ 0.6
Igkv3-1A0A075B5P1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Igkv3-1A0A075B5P1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.74■□□□□ 0.59
Igkv3-1A0A075B5P1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.74■□□□□ 0.59
Igkv3-1A0A075B5P1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv3-1A0A075B5P1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv3-1A0A075B5P1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv3-1A0A075B5P1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Igkv3-1A0A075B5P1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Igkv3-1A0A075B5P1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Igkv3-1A0A075B5P1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Igkv3-1A0A075B5P1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Igkv3-1A0A075B5P1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.64■□□□□ 0.57
Igkv3-1A0A075B5P1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv3-1A0A075B5P1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv3-1A0A075B5P1 Gm25262-201ENSMUST00000174934 133 ntBASIC18.57■□□□□ 0.56
Igkv3-1A0A075B5P1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv3-1A0A075B5P1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv3-1A0A075B5P1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv3-1A0A075B5P1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.55■□□□□ 0.56
Igkv3-1A0A075B5P1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Igkv3-1A0A075B5P1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv3-1A0A075B5P1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv3-1A0A075B5P1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Igkv3-1A0A075B5P1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv3-1A0A075B5P1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv3-1A0A075B5P1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv3-1A0A075B5P1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Igkv3-1A0A075B5P1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv3-1A0A075B5P1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.48■□□□□ 0.55
Igkv3-1A0A075B5P1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv3-1A0A075B5P1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv3-1A0A075B5P1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv3-1A0A075B5P1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv3-1A0A075B5P1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv3-1A0A075B5P1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv3-1A0A075B5P1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv3-1A0A075B5P1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv3-1A0A075B5P1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.43■□□□□ 0.54
Igkv3-1A0A075B5P1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv3-1A0A075B5P1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv3-1A0A075B5P1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Igkv3-1A0A075B5P1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Igkv3-1A0A075B5P1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv3-1A0A075B5P1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv3-1A0A075B5P1 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.36■□□□□ 0.53
Igkv3-1A0A075B5P1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv3-1A0A075B5P1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv3-1A0A075B5P1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv3-1A0A075B5P1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv3-1A0A075B5P1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.26■□□□□ 0.51
Igkv3-1A0A075B5P1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv3-1A0A075B5P1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv3-1A0A075B5P1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv3-1A0A075B5P1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv3-1A0A075B5P1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv3-1A0A075B5P1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.2■□□□□ 0.5
Igkv3-1A0A075B5P1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv3-1A0A075B5P1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv3-1A0A075B5P1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv3-1A0A075B5P1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv3-1A0A075B5P1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.19■□□□□ 0.5
Igkv3-1A0A075B5P1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.17■□□□□ 0.5
Igkv3-1A0A075B5P1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Igkv3-1A0A075B5P1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv3-1A0A075B5P1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Igkv3-1A0A075B5P1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Igkv3-1A0A075B5P1 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.14■□□□□ 0.49
Igkv3-1A0A075B5P1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Igkv3-1A0A075B5P1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv3-1A0A075B5P1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv3-1A0A075B5P1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv3-1A0A075B5P1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv3-1A0A075B5P1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Igkv3-1A0A075B5P1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv3-1A0A075B5P1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv3-1A0A075B5P1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Igkv3-1A0A075B5P1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Igkv3-1A0A075B5P1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Igkv3-1A0A075B5P1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv3-1A0A075B5P1 Gm27322-201ENSMUST00000184007 104 ntBASIC18.03■□□□□ 0.48
Igkv3-1A0A075B5P1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Igkv3-1A0A075B5P1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.03■□□□□ 0.48
Igkv3-1A0A075B5P1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv3-1A0A075B5P1 Gm17082-201ENSMUST00000166043 1091 ntBASIC18■□□□□ 0.47
Igkv3-1A0A075B5P1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv3-1A0A075B5P1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv3-1A0A075B5P1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv3-1A0A075B5P1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms