Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb1S4R1E0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.2■□□□□ 0.66
H2afb1S4R1E0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb1S4R1E0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.19■□□□□ 0.66
H2afb1S4R1E0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb1S4R1E0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb1S4R1E0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
H2afb1S4R1E0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb1S4R1E0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
H2afb1S4R1E0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb1S4R1E0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb1S4R1E0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb1S4R1E0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb1S4R1E0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb1S4R1E0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb1S4R1E0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb1S4R1E0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb1S4R1E0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb1S4R1E0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
H2afb1S4R1E0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
H2afb1S4R1E0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb1S4R1E0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.17■□□□□ 0.66
H2afb1S4R1E0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb1S4R1E0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb1S4R1E0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb1S4R1E0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb1S4R1E0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
H2afb1S4R1E0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.16■□□□□ 0.66
H2afb1S4R1E0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb1S4R1E0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.16■□□□□ 0.66
H2afb1S4R1E0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
H2afb1S4R1E0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
H2afb1S4R1E0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb1S4R1E0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb1S4R1E0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
H2afb1S4R1E0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb1S4R1E0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.15■□□□□ 0.66
H2afb1S4R1E0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb1S4R1E0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
H2afb1S4R1E0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb1S4R1E0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
H2afb1S4R1E0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
H2afb1S4R1E0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
H2afb1S4R1E0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb1S4R1E0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb1S4R1E0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb1S4R1E0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb1S4R1E0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb1S4R1E0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb1S4R1E0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb1S4R1E0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
H2afb1S4R1E0 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.13■□□□□ 0.65
H2afb1S4R1E0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
H2afb1S4R1E0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.13■□□□□ 0.65
H2afb1S4R1E0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb1S4R1E0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
H2afb1S4R1E0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb1S4R1E0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb1S4R1E0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb1S4R1E0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
H2afb1S4R1E0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
H2afb1S4R1E0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb1S4R1E0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb1S4R1E0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb1S4R1E0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb1S4R1E0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb1S4R1E0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb1S4R1E0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.11■□□□□ 0.65
H2afb1S4R1E0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.11■□□□□ 0.65
H2afb1S4R1E0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb1S4R1E0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb1S4R1E0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb1S4R1E0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
H2afb1S4R1E0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb1S4R1E0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb1S4R1E0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb1S4R1E0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb1S4R1E0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb1S4R1E0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb1S4R1E0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.1■□□□□ 0.65
H2afb1S4R1E0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
H2afb1S4R1E0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb1S4R1E0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb1S4R1E0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb1S4R1E0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb1S4R1E0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.1■□□□□ 0.65
H2afb1S4R1E0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb1S4R1E0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms