Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Herpud1Q9JJK5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Herpud1Q9JJK5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Herpud1Q9JJK5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Herpud1Q9JJK5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Herpud1Q9JJK5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Herpud1Q9JJK5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Herpud1Q9JJK5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Herpud1Q9JJK5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.66■□□□□ 0.42
Herpud1Q9JJK5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Herpud1Q9JJK5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.66■□□□□ 0.42
Herpud1Q9JJK5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Herpud1Q9JJK5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Herpud1Q9JJK5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herpud1Q9JJK5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herpud1Q9JJK5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herpud1Q9JJK5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herpud1Q9JJK5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Herpud1Q9JJK5 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.65■□□□□ 0.42
Herpud1Q9JJK5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Herpud1Q9JJK5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Herpud1Q9JJK5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Herpud1Q9JJK5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Herpud1Q9JJK5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Herpud1Q9JJK5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Herpud1Q9JJK5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Herpud1Q9JJK5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herpud1Q9JJK5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.64■□□□□ 0.41
Herpud1Q9JJK5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Herpud1Q9JJK5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herpud1Q9JJK5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herpud1Q9JJK5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herpud1Q9JJK5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Herpud1Q9JJK5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Herpud1Q9JJK5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Herpud1Q9JJK5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.63■□□□□ 0.41
Herpud1Q9JJK5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Herpud1Q9JJK5 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.61■□□□□ 0.41
Herpud1Q9JJK5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herpud1Q9JJK5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herpud1Q9JJK5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Herpud1Q9JJK5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herpud1Q9JJK5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herpud1Q9JJK5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.61■□□□□ 0.41
Herpud1Q9JJK5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Herpud1Q9JJK5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herpud1Q9JJK5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Herpud1Q9JJK5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herpud1Q9JJK5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Herpud1Q9JJK5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herpud1Q9JJK5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Herpud1Q9JJK5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Herpud1Q9JJK5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Gm11175-201ENSMUST00000116172 543 ntBASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herpud1Q9JJK5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Herpud1Q9JJK5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.58■□□□□ 0.41
Herpud1Q9JJK5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Herpud1Q9JJK5 Gm27502-201ENSMUST00000183495 199 ntBASIC17.58■□□□□ 0.4
Herpud1Q9JJK5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Herpud1Q9JJK5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.58■□□□□ 0.4
Herpud1Q9JJK5 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.58■□□□□ 0.4
Herpud1Q9JJK5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Herpud1Q9JJK5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Herpud1Q9JJK5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Herpud1Q9JJK5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Herpud1Q9JJK5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Herpud1Q9JJK5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Herpud1Q9JJK5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Herpud1Q9JJK5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Herpud1Q9JJK5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Herpud1Q9JJK5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Herpud1Q9JJK5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.57■□□□□ 0.4
Herpud1Q9JJK5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Herpud1Q9JJK5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms