Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.67■□□□□ 0.74
Cdc40Q9DC48 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc40Q9DC48 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cdc40Q9DC48 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc40Q9DC48 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc40Q9DC48 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc40Q9DC48 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc40Q9DC48 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc40Q9DC48 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdc40Q9DC48 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc40Q9DC48 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc40Q9DC48 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc40Q9DC48 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc40Q9DC48 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc40Q9DC48 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.66■□□□□ 0.74
Cdc40Q9DC48 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.66■□□□□ 0.74
Cdc40Q9DC48 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc40Q9DC48 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdc40Q9DC48 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.65■□□□□ 0.74
Cdc40Q9DC48 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc40Q9DC48 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc40Q9DC48 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc40Q9DC48 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cdc40Q9DC48 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc40Q9DC48 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdc40Q9DC48 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.65■□□□□ 0.74
Cdc40Q9DC48 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdc40Q9DC48 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdc40Q9DC48 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.64■□□□□ 0.73
Cdc40Q9DC48 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdc40Q9DC48 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cdc40Q9DC48 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdc40Q9DC48 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc40Q9DC48 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Cdc40Q9DC48 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc40Q9DC48 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc40Q9DC48 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc40Q9DC48 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc40Q9DC48 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc40Q9DC48 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.63■□□□□ 0.73
Cdc40Q9DC48 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdc40Q9DC48 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.62■□□□□ 0.73
Cdc40Q9DC48 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.62■□□□□ 0.73
Cdc40Q9DC48 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdc40Q9DC48 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdc40Q9DC48 Gm14117-201ENSMUST00000122417 843 ntBASIC19.62■□□□□ 0.73
Cdc40Q9DC48 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdc40Q9DC48 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.62■□□□□ 0.73
Cdc40Q9DC48 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cdc40Q9DC48 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cdc40Q9DC48 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdc40Q9DC48 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdc40Q9DC48 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdc40Q9DC48 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdc40Q9DC48 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdc40Q9DC48 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdc40Q9DC48 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdc40Q9DC48 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdc40Q9DC48 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdc40Q9DC48 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdc40Q9DC48 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdc40Q9DC48 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdc40Q9DC48 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdc40Q9DC48 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdc40Q9DC48 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdc40Q9DC48 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdc40Q9DC48 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdc40Q9DC48 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cdc40Q9DC48 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdc40Q9DC48 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdc40Q9DC48 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.59■□□□□ 0.73
Cdc40Q9DC48 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdc40Q9DC48 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdc40Q9DC48 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdc40Q9DC48 Gm10232-201ENSMUST00000089221 720 ntBASIC19.58■□□□□ 0.72
Cdc40Q9DC48 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdc40Q9DC48 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdc40Q9DC48 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdc40Q9DC48 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdc40Q9DC48 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cdc40Q9DC48 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.57■□□□□ 0.72
Cdc40Q9DC48 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdc40Q9DC48 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cdc40Q9DC48 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cdc40Q9DC48 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdc40Q9DC48 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdc40Q9DC48 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms