Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm7Q9CQQ8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm7Q9CQQ8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Lsm7Q9CQQ8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.58■■□□□ 1.05
Lsm7Q9CQQ8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lsm7Q9CQQ8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lsm7Q9CQQ8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Lsm7Q9CQQ8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lsm7Q9CQQ8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lsm7Q9CQQ8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lsm7Q9CQQ8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lsm7Q9CQQ8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lsm7Q9CQQ8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lsm7Q9CQQ8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lsm7Q9CQQ8 Gm10399-202ENSMUST00000202768 748 ntBASIC21.57■■□□□ 1.04
Lsm7Q9CQQ8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.57■■□□□ 1.04
Lsm7Q9CQQ8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Lsm7Q9CQQ8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm7Q9CQQ8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm7Q9CQQ8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.56■■□□□ 1.04
Lsm7Q9CQQ8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.56■■□□□ 1.04
Lsm7Q9CQQ8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm7Q9CQQ8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm7Q9CQQ8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm7Q9CQQ8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Lsm7Q9CQQ8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm7Q9CQQ8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm7Q9CQQ8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm7Q9CQQ8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm7Q9CQQ8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm7Q9CQQ8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm7Q9CQQ8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.55■■□□□ 1.04
Lsm7Q9CQQ8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm7Q9CQQ8 Gm40881-201ENSMUST00000223397 166 ntBASIC21.55■■□□□ 1.04
Lsm7Q9CQQ8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm7Q9CQQ8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm7Q9CQQ8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm7Q9CQQ8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lsm7Q9CQQ8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Lsm7Q9CQQ8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.54■■□□□ 1.04
Lsm7Q9CQQ8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.54■■□□□ 1.04
Lsm7Q9CQQ8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lsm7Q9CQQ8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Lsm7Q9CQQ8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lsm7Q9CQQ8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lsm7Q9CQQ8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lsm7Q9CQQ8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lsm7Q9CQQ8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Lsm7Q9CQQ8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.52■■□□□ 1.04
Lsm7Q9CQQ8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lsm7Q9CQQ8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Lsm7Q9CQQ8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lsm7Q9CQQ8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lsm7Q9CQQ8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lsm7Q9CQQ8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.51■■□□□ 1.03
Lsm7Q9CQQ8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lsm7Q9CQQ8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Lsm7Q9CQQ8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm7Q9CQQ8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm7Q9CQQ8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.5■■□□□ 1.03
Lsm7Q9CQQ8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm7Q9CQQ8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm7Q9CQQ8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm7Q9CQQ8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm7Q9CQQ8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Lsm7Q9CQQ8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Lsm7Q9CQQ8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
Lsm7Q9CQQ8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm7Q9CQQ8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm7Q9CQQ8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm7Q9CQQ8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.47■■□□□ 1.03
Lsm7Q9CQQ8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.47■■□□□ 1.03
Lsm7Q9CQQ8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.47■■□□□ 1.03
Lsm7Q9CQQ8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lsm7Q9CQQ8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm7Q9CQQ8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm7Q9CQQ8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Lsm7Q9CQQ8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.46■■□□□ 1.03
Lsm7Q9CQQ8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm7Q9CQQ8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm7Q9CQQ8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm7Q9CQQ8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Lsm7Q9CQQ8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm7Q9CQQ8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm7Q9CQQ8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm7Q9CQQ8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm7Q9CQQ8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm7Q9CQQ8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms