Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf138Q9CQE0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf138Q9CQE0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf138Q9CQE0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.25■□□□□ 0.83
Rnf138Q9CQE0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.24■□□□□ 0.83
Rnf138Q9CQE0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf138Q9CQE0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.24■□□□□ 0.83
Rnf138Q9CQE0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf138Q9CQE0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf138Q9CQE0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf138Q9CQE0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf138Q9CQE0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf138Q9CQE0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf138Q9CQE0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.22■□□□□ 0.83
Rnf138Q9CQE0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf138Q9CQE0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf138Q9CQE0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rnf138Q9CQE0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf138Q9CQE0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf138Q9CQE0 Gm7417-201ENSMUST00000192950 473 ntBASIC20.21■□□□□ 0.83
Rnf138Q9CQE0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf138Q9CQE0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf138Q9CQE0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rnf138Q9CQE0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf138Q9CQE0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rnf138Q9CQE0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.2■□□□□ 0.82
Rnf138Q9CQE0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.2■□□□□ 0.82
Rnf138Q9CQE0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf138Q9CQE0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf138Q9CQE0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf138Q9CQE0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Rnf138Q9CQE0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf138Q9CQE0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.2■□□□□ 0.82
Rnf138Q9CQE0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138Q9CQE0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138Q9CQE0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138Q9CQE0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138Q9CQE0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138Q9CQE0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138Q9CQE0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138Q9CQE0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.19■□□□□ 0.82
Rnf138Q9CQE0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138Q9CQE0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.19■□□□□ 0.82
Rnf138Q9CQE0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.19■□□□□ 0.82
Rnf138Q9CQE0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf138Q9CQE0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rnf138Q9CQE0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.18■□□□□ 0.82
Rnf138Q9CQE0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf138Q9CQE0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf138Q9CQE0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.17■□□□□ 0.82
Rnf138Q9CQE0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.17■□□□□ 0.82
Rnf138Q9CQE0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.17■□□□□ 0.82
Rnf138Q9CQE0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf138Q9CQE0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf138Q9CQE0 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.17■□□□□ 0.82
Rnf138Q9CQE0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rnf138Q9CQE0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf138Q9CQE0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rnf138Q9CQE0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf138Q9CQE0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf138Q9CQE0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf138Q9CQE0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf138Q9CQE0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf138Q9CQE0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.16■□□□□ 0.82
Rnf138Q9CQE0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.16■□□□□ 0.82
Rnf138Q9CQE0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.16■□□□□ 0.82
Rnf138Q9CQE0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf138Q9CQE0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rnf138Q9CQE0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf138Q9CQE0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rnf138Q9CQE0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138Q9CQE0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.15■□□□□ 0.82
Rnf138Q9CQE0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138Q9CQE0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138Q9CQE0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138Q9CQE0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Rnf138Q9CQE0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138Q9CQE0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.15■□□□□ 0.82
Rnf138Q9CQE0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf138Q9CQE0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf138Q9CQE0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138Q9CQE0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138Q9CQE0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.14■□□□□ 0.81
Rnf138Q9CQE0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
Rnf138Q9CQE0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138Q9CQE0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.14■□□□□ 0.81
Rnf138Q9CQE0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138Q9CQE0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138Q9CQE0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138Q9CQE0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf138Q9CQE0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf138Q9CQE0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rnf138Q9CQE0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138Q9CQE0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138Q9CQE0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138Q9CQE0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138Q9CQE0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.12■□□□□ 0.81
Rnf138Q9CQE0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138Q9CQE0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138Q9CQE0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms