Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ska1Q9CPV1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.99■□□□□ 0.79
Ska1Q9CPV1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ska1Q9CPV1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ska1Q9CPV1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ska1Q9CPV1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ska1Q9CPV1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ska1Q9CPV1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ska1Q9CPV1 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.99■□□□□ 0.79
Ska1Q9CPV1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ska1Q9CPV1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.98■□□□□ 0.79
Ska1Q9CPV1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ska1Q9CPV1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ska1Q9CPV1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ska1Q9CPV1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ska1Q9CPV1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ska1Q9CPV1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.98■□□□□ 0.79
Ska1Q9CPV1 Gm44428-201ENSMUST00000204474 874 ntBASIC19.98■□□□□ 0.79
Ska1Q9CPV1 Gm9806-201ENSMUST00000051080 552 ntBASIC19.98■□□□□ 0.79
Ska1Q9CPV1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ska1Q9CPV1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ska1Q9CPV1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ska1Q9CPV1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ska1Q9CPV1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ska1Q9CPV1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ska1Q9CPV1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ska1Q9CPV1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ska1Q9CPV1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ska1Q9CPV1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ska1Q9CPV1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.97■□□□□ 0.79
Ska1Q9CPV1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ska1Q9CPV1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ska1Q9CPV1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ska1Q9CPV1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ska1Q9CPV1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ska1Q9CPV1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ska1Q9CPV1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ska1Q9CPV1 Scarna2-201ENSMUST00000157560 414 ntBASIC19.96■□□□□ 0.79
Ska1Q9CPV1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Ska1Q9CPV1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ska1Q9CPV1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ska1Q9CPV1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ska1Q9CPV1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ska1Q9CPV1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ska1Q9CPV1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ska1Q9CPV1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.95■□□□□ 0.78
Ska1Q9CPV1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ska1Q9CPV1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ska1Q9CPV1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ska1Q9CPV1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ska1Q9CPV1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.94■□□□□ 0.78
Ska1Q9CPV1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ska1Q9CPV1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ska1Q9CPV1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ska1Q9CPV1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ska1Q9CPV1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ska1Q9CPV1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ska1Q9CPV1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ska1Q9CPV1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ska1Q9CPV1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ska1Q9CPV1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ska1Q9CPV1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ska1Q9CPV1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
Ska1Q9CPV1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ska1Q9CPV1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ska1Q9CPV1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ska1Q9CPV1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ska1Q9CPV1 Gm11687-201ENSMUST00000118911 886 ntBASIC19.92■□□□□ 0.78
Ska1Q9CPV1 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.92■□□□□ 0.78
Ska1Q9CPV1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.92■□□□□ 0.78
Ska1Q9CPV1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.92■□□□□ 0.78
Ska1Q9CPV1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ska1Q9CPV1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ska1Q9CPV1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ska1Q9CPV1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ska1Q9CPV1 Gm16437-201ENSMUST00000025669 507 ntBASIC19.91■□□□□ 0.78
Ska1Q9CPV1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ska1Q9CPV1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ska1Q9CPV1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ska1Q9CPV1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.9■□□□□ 0.78
Ska1Q9CPV1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ska1Q9CPV1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ska1Q9CPV1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ska1Q9CPV1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ska1Q9CPV1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ska1Q9CPV1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Ska1Q9CPV1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ska1Q9CPV1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ska1Q9CPV1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ska1Q9CPV1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ska1Q9CPV1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ska1Q9CPV1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ska1Q9CPV1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ska1Q9CPV1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ska1Q9CPV1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ska1Q9CPV1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ska1Q9CPV1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ska1Q9CPV1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.87■□□□□ 0.77
Ska1Q9CPV1 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.87■□□□□ 0.77
Ska1Q9CPV1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 276.4 ms