Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim33Q99PP7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim33Q99PP7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim33Q99PP7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21■□□□□ 0.95
Trim33Q99PP7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21■□□□□ 0.95
Trim33Q99PP7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim33Q99PP7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim33Q99PP7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim33Q99PP7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim33Q99PP7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim33Q99PP7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trim33Q99PP7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim33Q99PP7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim33Q99PP7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim33Q99PP7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim33Q99PP7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim33Q99PP7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim33Q99PP7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim33Q99PP7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim33Q99PP7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim33Q99PP7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim33Q99PP7 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.98■□□□□ 0.95
Trim33Q99PP7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim33Q99PP7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim33Q99PP7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim33Q99PP7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim33Q99PP7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim33Q99PP7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim33Q99PP7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim33Q99PP7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.97■□□□□ 0.95
Trim33Q99PP7 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.97■□□□□ 0.95
Trim33Q99PP7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim33Q99PP7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim33Q99PP7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim33Q99PP7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim33Q99PP7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim33Q99PP7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Trim33Q99PP7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim33Q99PP7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Trim33Q99PP7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim33Q99PP7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim33Q99PP7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim33Q99PP7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.95■□□□□ 0.94
Trim33Q99PP7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.95■□□□□ 0.94
Trim33Q99PP7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim33Q99PP7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim33Q99PP7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trim33Q99PP7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.95■□□□□ 0.94
Trim33Q99PP7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim33Q99PP7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim33Q99PP7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim33Q99PP7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim33Q99PP7 Gm45444-201ENSMUST00000211394 898 ntBASIC20.94■□□□□ 0.94
Trim33Q99PP7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim33Q99PP7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim33Q99PP7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim33Q99PP7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim33Q99PP7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Trim33Q99PP7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim33Q99PP7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim33Q99PP7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trim33Q99PP7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim33Q99PP7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim33Q99PP7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Trim33Q99PP7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim33Q99PP7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim33Q99PP7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim33Q99PP7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim33Q99PP7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim33Q99PP7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim33Q99PP7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trim33Q99PP7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Trim33Q99PP7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim33Q99PP7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim33Q99PP7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim33Q99PP7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Trim33Q99PP7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim33Q99PP7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim33Q99PP7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim33Q99PP7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim33Q99PP7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim33Q99PP7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim33Q99PP7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim33Q99PP7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Trim33Q99PP7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim33Q99PP7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.91■□□□□ 0.94
Trim33Q99PP7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms