Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Raf1Q99N57 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Raf1Q99N57 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raf1Q99N57 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raf1Q99N57 Gm14523-201ENSMUST00000117260 558 ntBASIC18.97■□□□□ 0.63
Raf1Q99N57 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raf1Q99N57 Terc-201ENSMUST00000082862 423 ntBASIC18.97■□□□□ 0.63
Raf1Q99N57 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Raf1Q99N57 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raf1Q99N57 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raf1Q99N57 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Raf1Q99N57 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raf1Q99N57 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raf1Q99N57 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raf1Q99N57 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raf1Q99N57 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raf1Q99N57 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raf1Q99N57 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raf1Q99N57 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Raf1Q99N57 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Raf1Q99N57 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Raf1Q99N57 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Raf1Q99N57 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Raf1Q99N57 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Raf1Q99N57 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Raf1Q99N57 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Raf1Q99N57 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
Raf1Q99N57 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Raf1Q99N57 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.94■□□□□ 0.62
Raf1Q99N57 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raf1Q99N57 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raf1Q99N57 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raf1Q99N57 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.94■□□□□ 0.62
Raf1Q99N57 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raf1Q99N57 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raf1Q99N57 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raf1Q99N57 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raf1Q99N57 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Raf1Q99N57 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Raf1Q99N57 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Raf1Q99N57 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Raf1Q99N57 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raf1Q99N57 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Raf1Q99N57 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raf1Q99N57 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Raf1Q99N57 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Raf1Q99N57 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raf1Q99N57 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raf1Q99N57 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raf1Q99N57 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raf1Q99N57 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.92■□□□□ 0.62
Raf1Q99N57 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Raf1Q99N57 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raf1Q99N57 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Raf1Q99N57 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Raf1Q99N57 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.91■□□□□ 0.62
Raf1Q99N57 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Raf1Q99N57 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Raf1Q99N57 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Raf1Q99N57 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Raf1Q99N57 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Raf1Q99N57 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.9■□□□□ 0.62
Raf1Q99N57 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.9■□□□□ 0.62
Raf1Q99N57 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Raf1Q99N57 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Raf1Q99N57 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Raf1Q99N57 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Raf1Q99N57 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Raf1Q99N57 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Raf1Q99N57 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Raf1Q99N57 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.89■□□□□ 0.61
Raf1Q99N57 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
Raf1Q99N57 Gm15039-201ENSMUST00000118914 875 ntBASIC18.89■□□□□ 0.61
Raf1Q99N57 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Raf1Q99N57 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Raf1Q99N57 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Raf1Q99N57 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Raf1Q99N57 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Raf1Q99N57 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.89■□□□□ 0.61
Raf1Q99N57 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Raf1Q99N57 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.88■□□□□ 0.61
Raf1Q99N57 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Raf1Q99N57 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Raf1Q99N57 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Raf1Q99N57 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Raf1Q99N57 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Raf1Q99N57 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Raf1Q99N57 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Raf1Q99N57 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Raf1Q99N57 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Raf1Q99N57 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.86■□□□□ 0.61
Raf1Q99N57 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Raf1Q99N57 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Raf1Q99N57 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.86■□□□□ 0.61
Raf1Q99N57 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Raf1Q99N57 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Raf1Q99N57 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Raf1Q99N57 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Raf1Q99N57 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Raf1Q99N57 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms