Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Scrt1Q99M85 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.64■□□□□ 0.57
Scrt1Q99M85 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scrt1Q99M85 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scrt1Q99M85 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scrt1Q99M85 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Scrt1Q99M85 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Scrt1Q99M85 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.64■□□□□ 0.57
Scrt1Q99M85 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scrt1Q99M85 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scrt1Q99M85 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scrt1Q99M85 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Scrt1Q99M85 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Scrt1Q99M85 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Scrt1Q99M85 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scrt1Q99M85 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scrt1Q99M85 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scrt1Q99M85 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scrt1Q99M85 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scrt1Q99M85 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scrt1Q99M85 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scrt1Q99M85 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scrt1Q99M85 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scrt1Q99M85 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scrt1Q99M85 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scrt1Q99M85 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.61■□□□□ 0.57
Scrt1Q99M85 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.61■□□□□ 0.57
Scrt1Q99M85 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.61■□□□□ 0.57
Scrt1Q99M85 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.61■□□□□ 0.57
Scrt1Q99M85 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scrt1Q99M85 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Scrt1Q99M85 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scrt1Q99M85 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scrt1Q99M85 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scrt1Q99M85 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.6■□□□□ 0.57
Scrt1Q99M85 Gm40881-201ENSMUST00000223397 166 ntBASIC18.6■□□□□ 0.57
Scrt1Q99M85 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.6■□□□□ 0.57
Scrt1Q99M85 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scrt1Q99M85 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Scrt1Q99M85 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.59■□□□□ 0.57
Scrt1Q99M85 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.59■□□□□ 0.57
Scrt1Q99M85 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.59■□□□□ 0.57
Scrt1Q99M85 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scrt1Q99M85 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scrt1Q99M85 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scrt1Q99M85 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scrt1Q99M85 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scrt1Q99M85 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scrt1Q99M85 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scrt1Q99M85 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scrt1Q99M85 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scrt1Q99M85 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Scrt1Q99M85 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scrt1Q99M85 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scrt1Q99M85 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.57■□□□□ 0.56
Scrt1Q99M85 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scrt1Q99M85 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scrt1Q99M85 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scrt1Q99M85 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scrt1Q99M85 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scrt1Q99M85 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.56■□□□□ 0.56
Scrt1Q99M85 Gm27454-201ENSMUST00000185090 204 ntBASIC18.56■□□□□ 0.56
Scrt1Q99M85 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scrt1Q99M85 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scrt1Q99M85 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.56■□□□□ 0.56
Scrt1Q99M85 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scrt1Q99M85 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Scrt1Q99M85 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scrt1Q99M85 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scrt1Q99M85 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scrt1Q99M85 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scrt1Q99M85 Gm45417-201ENSMUST00000209533 758 ntBASIC18.55■□□□□ 0.56
Scrt1Q99M85 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.55■□□□□ 0.56
Scrt1Q99M85 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.55■□□□□ 0.56
Scrt1Q99M85 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scrt1Q99M85 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scrt1Q99M85 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scrt1Q99M85 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Scrt1Q99M85 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Scrt1Q99M85 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scrt1Q99M85 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scrt1Q99M85 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.54■□□□□ 0.56
Scrt1Q99M85 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scrt1Q99M85 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scrt1Q99M85 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scrt1Q99M85 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scrt1Q99M85 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scrt1Q99M85 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scrt1Q99M85 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Scrt1Q99M85 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scrt1Q99M85 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scrt1Q99M85 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scrt1Q99M85 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scrt1Q99M85 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Scrt1Q99M85 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.53■□□□□ 0.56
Scrt1Q99M85 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scrt1Q99M85 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scrt1Q99M85 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scrt1Q99M85 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scrt1Q99M85 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms