Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb1Q91XX8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb1Q91XX8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.16■■□□□ 1.14
Pcdhgb1Q91XX8 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.16■■□□□ 1.14
Pcdhgb1Q91XX8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb1Q91XX8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb1Q91XX8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb1Q91XX8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb1Q91XX8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb1Q91XX8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb1Q91XX8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb1Q91XX8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb1Q91XX8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.14■■□□□ 1.14
Pcdhgb1Q91XX8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgb1Q91XX8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
Pcdhgb1Q91XX8 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.14■■□□□ 1.13
Pcdhgb1Q91XX8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgb1Q91XX8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.14■■□□□ 1.13
Pcdhgb1Q91XX8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
Pcdhgb1Q91XX8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Pcdhgb1Q91XX8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgb1Q91XX8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgb1Q91XX8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.13■■□□□ 1.13
Pcdhgb1Q91XX8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb1Q91XX8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb1Q91XX8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Pcdhgb1Q91XX8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb1Q91XX8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb1Q91XX8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb1Q91XX8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgb1Q91XX8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Pcdhgb1Q91XX8 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.12■■□□□ 1.13
Pcdhgb1Q91XX8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.12■■□□□ 1.13
Pcdhgb1Q91XX8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.12■■□□□ 1.13
Pcdhgb1Q91XX8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.12■■□□□ 1.13
Pcdhgb1Q91XX8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.12■■□□□ 1.13
Pcdhgb1Q91XX8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgb1Q91XX8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgb1Q91XX8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Pcdhgb1Q91XX8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgb1Q91XX8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.11■■□□□ 1.13
Pcdhgb1Q91XX8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.11■■□□□ 1.13
Pcdhgb1Q91XX8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgb1Q91XX8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Pcdhgb1Q91XX8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgb1Q91XX8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgb1Q91XX8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgb1Q91XX8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgb1Q91XX8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgb1Q91XX8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgb1Q91XX8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgb1Q91XX8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdhgb1Q91XX8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Pcdhgb1Q91XX8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdhgb1Q91XX8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb1Q91XX8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb1Q91XX8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb1Q91XX8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb1Q91XX8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb1Q91XX8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.07■■□□□ 1.12
Pcdhgb1Q91XX8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.07■■□□□ 1.12
Pcdhgb1Q91XX8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.07■■□□□ 1.12
Pcdhgb1Q91XX8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.07■■□□□ 1.12
Pcdhgb1Q91XX8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
Pcdhgb1Q91XX8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb1Q91XX8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb1Q91XX8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgb1Q91XX8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgb1Q91XX8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgb1Q91XX8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Pcdhgb1Q91XX8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgb1Q91XX8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.06■■□□□ 1.12
Pcdhgb1Q91XX8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgb1Q91XX8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgb1Q91XX8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgb1Q91XX8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb1Q91XX8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb1Q91XX8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb1Q91XX8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb1Q91XX8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.05■■□□□ 1.12
Pcdhgb1Q91XX8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.05■■□□□ 1.12
Pcdhgb1Q91XX8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.05■■□□□ 1.12
Pcdhgb1Q91XX8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb1Q91XX8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb1Q91XX8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb1Q91XX8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.04■■□□□ 1.12
Pcdhgb1Q91XX8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Pcdhgb1Q91XX8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.04■■□□□ 1.12
Pcdhgb1Q91XX8 Gm7417-201ENSMUST00000192950 473 ntBASIC22.04■■□□□ 1.12
Pcdhgb1Q91XX8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgb1Q91XX8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgb1Q91XX8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgb1Q91XX8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.04■■□□□ 1.12
Pcdhgb1Q91XX8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgb1Q91XX8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgb1Q91XX8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgb1Q91XX8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgb1Q91XX8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Pcdhgb1Q91XX8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Pcdhgb1Q91XX8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms