Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
Trim60Q8VI40 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim60Q8VI40 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim60Q8VI40 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.03■■□□□ 1.12
Trim60Q8VI40 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim60Q8VI40 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim60Q8VI40 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim60Q8VI40 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.02■■□□□ 1.12
Trim60Q8VI40 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim60Q8VI40 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trim60Q8VI40 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.01■■□□□ 1.11
Trim60Q8VI40 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim60Q8VI40 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim60Q8VI40 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim60Q8VI40 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim60Q8VI40 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22■■□□□ 1.11
Trim60Q8VI40 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim60Q8VI40 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim60Q8VI40 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Trim60Q8VI40 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim60Q8VI40 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim60Q8VI40 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.99■■□□□ 1.11
Trim60Q8VI40 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Trim60Q8VI40 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim60Q8VI40 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim60Q8VI40 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Trim60Q8VI40 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Trim60Q8VI40 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim60Q8VI40 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Trim60Q8VI40 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim60Q8VI40 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Trim60Q8VI40 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim60Q8VI40 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim60Q8VI40 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim60Q8VI40 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim60Q8VI40 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim60Q8VI40 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Trim60Q8VI40 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim60Q8VI40 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Trim60Q8VI40 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.96■■□□□ 1.11
Trim60Q8VI40 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim60Q8VI40 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim60Q8VI40 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim60Q8VI40 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim60Q8VI40 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trim60Q8VI40 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.95■■□□□ 1.1
Trim60Q8VI40 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim60Q8VI40 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim60Q8VI40 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim60Q8VI40 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Trim60Q8VI40 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Trim60Q8VI40 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim60Q8VI40 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Trim60Q8VI40 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim60Q8VI40 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim60Q8VI40 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Trim60Q8VI40 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim60Q8VI40 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim60Q8VI40 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim60Q8VI40 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Trim60Q8VI40 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim60Q8VI40 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim60Q8VI40 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim60Q8VI40 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim60Q8VI40 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim60Q8VI40 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim60Q8VI40 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim60Q8VI40 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim60Q8VI40 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim60Q8VI40 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Trim60Q8VI40 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim60Q8VI40 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim60Q8VI40 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.91■■□□□ 1.1
Trim60Q8VI40 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim60Q8VI40 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Trim60Q8VI40 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim60Q8VI40 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.91■■□□□ 1.1
Trim60Q8VI40 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Trim60Q8VI40 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim60Q8VI40 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim60Q8VI40 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim60Q8VI40 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim60Q8VI40 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.9■■□□□ 1.1
Trim60Q8VI40 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.9■■□□□ 1.1
Trim60Q8VI40 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim60Q8VI40 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.9■■□□□ 1.1
Trim60Q8VI40 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim60Q8VI40 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim60Q8VI40 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim60Q8VI40 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim60Q8VI40 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim60Q8VI40 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim60Q8VI40 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim60Q8VI40 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim60Q8VI40 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
Trim60Q8VI40 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim60Q8VI40 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim60Q8VI40 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Trim60Q8VI40 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim60Q8VI40 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms