Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cspg4Q8VHY0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.62■□□□□ 0.57
Cspg4Q8VHY0 Spcs1-204ENSMUST00000226782 949 ntBASIC18.62■□□□□ 0.57
Cspg4Q8VHY0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.62■□□□□ 0.57
Cspg4Q8VHY0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cspg4Q8VHY0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg4Q8VHY0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.61■□□□□ 0.57
Cspg4Q8VHY0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg4Q8VHY0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg4Q8VHY0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.61■□□□□ 0.57
Cspg4Q8VHY0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cspg4Q8VHY0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg4Q8VHY0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg4Q8VHY0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg4Q8VHY0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.6■□□□□ 0.57
Cspg4Q8VHY0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Cspg4Q8VHY0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg4Q8VHY0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
Cspg4Q8VHY0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg4Q8VHY0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg4Q8VHY0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg4Q8VHY0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg4Q8VHY0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.59■□□□□ 0.57
Cspg4Q8VHY0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg4Q8VHY0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg4Q8VHY0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.59■□□□□ 0.57
Cspg4Q8VHY0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg4Q8VHY0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg4Q8VHY0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg4Q8VHY0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg4Q8VHY0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cspg4Q8VHY0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cspg4Q8VHY0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cspg4Q8VHY0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cspg4Q8VHY0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cspg4Q8VHY0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg4Q8VHY0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg4Q8VHY0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg4Q8VHY0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg4Q8VHY0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg4Q8VHY0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg4Q8VHY0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg4Q8VHY0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg4Q8VHY0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg4Q8VHY0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cspg4Q8VHY0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg4Q8VHY0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg4Q8VHY0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Cspg4Q8VHY0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.56■□□□□ 0.56
Cspg4Q8VHY0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
Cspg4Q8VHY0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.56■□□□□ 0.56
Cspg4Q8VHY0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg4Q8VHY0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg4Q8VHY0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg4Q8VHY0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cspg4Q8VHY0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg4Q8VHY0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg4Q8VHY0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg4Q8VHY0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg4Q8VHY0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg4Q8VHY0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg4Q8VHY0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg4Q8VHY0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg4Q8VHY0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg4Q8VHY0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg4Q8VHY0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.53■□□□□ 0.56
Cspg4Q8VHY0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg4Q8VHY0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg4Q8VHY0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg4Q8VHY0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cspg4Q8VHY0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cspg4Q8VHY0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cspg4Q8VHY0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cspg4Q8VHY0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.52■□□□□ 0.56
Cspg4Q8VHY0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cspg4Q8VHY0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.51■□□□□ 0.55
Cspg4Q8VHY0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg4Q8VHY0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg4Q8VHY0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cspg4Q8VHY0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg4Q8VHY0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cspg4Q8VHY0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg4Q8VHY0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg4Q8VHY0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg4Q8VHY0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg4Q8VHY0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg4Q8VHY0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg4Q8VHY0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Cspg4Q8VHY0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg4Q8VHY0 Gm10849-201ENSMUST00000100397 618 ntBASIC18.49■□□□□ 0.55
Cspg4Q8VHY0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg4Q8VHY0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg4Q8VHY0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.49■□□□□ 0.55
Cspg4Q8VHY0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Cspg4Q8VHY0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cspg4Q8VHY0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cspg4Q8VHY0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cspg4Q8VHY0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cspg4Q8VHY0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cspg4Q8VHY0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms