Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q8VDP2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q8VDP2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q8VDP2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Q8VDP2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Q8VDP2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q8VDP2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q8VDP2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q8VDP2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q8VDP2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q8VDP2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q8VDP2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Q8VDP2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q8VDP2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Q8VDP2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q8VDP2 Gm24970-201ENSMUST00000175582 82 ntBASIC20.63■□□□□ 0.89
Q8VDP2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.62■□□□□ 0.89
Q8VDP2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
Q8VDP2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Q8VDP2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q8VDP2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q8VDP2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Q8VDP2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.62■□□□□ 0.89
Q8VDP2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q8VDP2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q8VDP2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q8VDP2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q8VDP2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Q8VDP2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q8VDP2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Q8VDP2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q8VDP2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q8VDP2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Q8VDP2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Q8VDP2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q8VDP2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q8VDP2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q8VDP2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q8VDP2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Q8VDP2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Q8VDP2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q8VDP2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q8VDP2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q8VDP2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q8VDP2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q8VDP2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Q8VDP2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.59■□□□□ 0.89
Q8VDP2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8VDP2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.59■□□□□ 0.89
Q8VDP2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8VDP2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8VDP2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Q8VDP2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8VDP2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q8VDP2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Q8VDP2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Q8VDP2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Q8VDP2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
Q8VDP2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Q8VDP2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Q8VDP2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q8VDP2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q8VDP2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q8VDP2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q8VDP2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Q8VDP2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Q8VDP2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Q8VDP2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q8VDP2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q8VDP2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q8VDP2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q8VDP2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q8VDP2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Q8VDP2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Q8VDP2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Q8VDP2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q8VDP2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q8VDP2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q8VDP2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Q8VDP2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Q8VDP2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q8VDP2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q8VDP2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.54■□□□□ 0.88
Q8VDP2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Q8VDP2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q8VDP2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Q8VDP2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Q8VDP2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Q8VDP2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Q8VDP2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Q8VDP2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q8VDP2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q8VDP2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q8VDP2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q8VDP2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q8VDP2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q8VDP2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Q8VDP2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q8VDP2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q8VDP2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms