Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdt1Q8R4E9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdt1Q8R4E9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdt1Q8R4E9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cdt1Q8R4E9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdt1Q8R4E9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdt1Q8R4E9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.54■□□□□ 0.88
Cdt1Q8R4E9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdt1Q8R4E9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdt1Q8R4E9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdt1Q8R4E9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Cdt1Q8R4E9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdt1Q8R4E9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdt1Q8R4E9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdt1Q8R4E9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdt1Q8R4E9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdt1Q8R4E9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdt1Q8R4E9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdt1Q8R4E9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cdt1Q8R4E9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdt1Q8R4E9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cdt1Q8R4E9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdt1Q8R4E9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Cdt1Q8R4E9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
Cdt1Q8R4E9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdt1Q8R4E9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdt1Q8R4E9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdt1Q8R4E9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdt1Q8R4E9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdt1Q8R4E9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdt1Q8R4E9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdt1Q8R4E9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.51■□□□□ 0.87
Cdt1Q8R4E9 Gm10232-201ENSMUST00000089221 720 ntBASIC20.51■□□□□ 0.87
Cdt1Q8R4E9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdt1Q8R4E9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdt1Q8R4E9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdt1Q8R4E9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.5■□□□□ 0.87
Cdt1Q8R4E9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdt1Q8R4E9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cdt1Q8R4E9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cdt1Q8R4E9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdt1Q8R4E9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cdt1Q8R4E9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdt1Q8R4E9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.49■□□□□ 0.87
Cdt1Q8R4E9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdt1Q8R4E9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.48■□□□□ 0.87
Cdt1Q8R4E9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdt1Q8R4E9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdt1Q8R4E9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdt1Q8R4E9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdt1Q8R4E9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.48■□□□□ 0.87
Cdt1Q8R4E9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdt1Q8R4E9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdt1Q8R4E9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdt1Q8R4E9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdt1Q8R4E9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdt1Q8R4E9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdt1Q8R4E9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdt1Q8R4E9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdt1Q8R4E9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdt1Q8R4E9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.46■□□□□ 0.87
Cdt1Q8R4E9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdt1Q8R4E9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdt1Q8R4E9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdt1Q8R4E9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdt1Q8R4E9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.46■□□□□ 0.87
Cdt1Q8R4E9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.45■□□□□ 0.87
Cdt1Q8R4E9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdt1Q8R4E9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdt1Q8R4E9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdt1Q8R4E9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.45■□□□□ 0.86
Cdt1Q8R4E9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cdt1Q8R4E9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdt1Q8R4E9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.44■□□□□ 0.86
Cdt1Q8R4E9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdt1Q8R4E9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cdt1Q8R4E9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdt1Q8R4E9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdt1Q8R4E9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cdt1Q8R4E9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdt1Q8R4E9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cdt1Q8R4E9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.44■□□□□ 0.86
Cdt1Q8R4E9 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.44■□□□□ 0.86
Cdt1Q8R4E9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdt1Q8R4E9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Cdt1Q8R4E9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdt1Q8R4E9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms