Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpp40Q8R1F9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpp40Q8R1F9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.97■■□□□ 1.27
Rpp40Q8R1F9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rpp40Q8R1F9 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.97■■□□□ 1.27
Rpp40Q8R1F9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.97■■□□□ 1.27
Rpp40Q8R1F9 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.97■■□□□ 1.27
Rpp40Q8R1F9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
Rpp40Q8R1F9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
Rpp40Q8R1F9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.97■■□□□ 1.27
Rpp40Q8R1F9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpp40Q8R1F9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpp40Q8R1F9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpp40Q8R1F9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpp40Q8R1F9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpp40Q8R1F9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpp40Q8R1F9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpp40Q8R1F9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpp40Q8R1F9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Rpp40Q8R1F9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpp40Q8R1F9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpp40Q8R1F9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Rpp40Q8R1F9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpp40Q8R1F9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpp40Q8R1F9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpp40Q8R1F9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpp40Q8R1F9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpp40Q8R1F9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpp40Q8R1F9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpp40Q8R1F9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpp40Q8R1F9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpp40Q8R1F9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpp40Q8R1F9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpp40Q8R1F9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rpp40Q8R1F9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Rpp40Q8R1F9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpp40Q8R1F9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Rpp40Q8R1F9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rpp40Q8R1F9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rpp40Q8R1F9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rpp40Q8R1F9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rpp40Q8R1F9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rpp40Q8R1F9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Rpp40Q8R1F9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.91■■□□□ 1.26
Rpp40Q8R1F9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rpp40Q8R1F9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rpp40Q8R1F9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rpp40Q8R1F9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rpp40Q8R1F9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.9■■□□□ 1.26
Rpp40Q8R1F9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rpp40Q8R1F9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.9■■□□□ 1.26
Rpp40Q8R1F9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rpp40Q8R1F9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.9■■□□□ 1.26
Rpp40Q8R1F9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rpp40Q8R1F9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Rpp40Q8R1F9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.89■■□□□ 1.25
Rpp40Q8R1F9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.89■■□□□ 1.25
Rpp40Q8R1F9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rpp40Q8R1F9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Rpp40Q8R1F9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Rpp40Q8R1F9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rpp40Q8R1F9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rpp40Q8R1F9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rpp40Q8R1F9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rpp40Q8R1F9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.88■■□□□ 1.25
Rpp40Q8R1F9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.88■■□□□ 1.25
Rpp40Q8R1F9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rpp40Q8R1F9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.88■■□□□ 1.25
Rpp40Q8R1F9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.88■■□□□ 1.25
Rpp40Q8R1F9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rpp40Q8R1F9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.88■■□□□ 1.25
Rpp40Q8R1F9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.87■■□□□ 1.25
Rpp40Q8R1F9 Gm9959-201ENSMUST00000068277 390 ntBASIC22.87■■□□□ 1.25
Rpp40Q8R1F9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.87■■□□□ 1.25
Rpp40Q8R1F9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.87■■□□□ 1.25
Rpp40Q8R1F9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rpp40Q8R1F9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpp40Q8R1F9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.86■■□□□ 1.25
Rpp40Q8R1F9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.86■■□□□ 1.25
Rpp40Q8R1F9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.86■■□□□ 1.25
Rpp40Q8R1F9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpp40Q8R1F9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Rpp40Q8R1F9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpp40Q8R1F9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rpp40Q8R1F9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rpp40Q8R1F9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Rpp40Q8R1F9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Rpp40Q8R1F9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.85■■□□□ 1.25
Rpp40Q8R1F9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpp40Q8R1F9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.85■■□□□ 1.25
Rpp40Q8R1F9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rpp40Q8R1F9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpp40Q8R1F9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Rpp40Q8R1F9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpp40Q8R1F9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.84■■□□□ 1.25
Rpp40Q8R1F9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpp40Q8R1F9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpp40Q8R1F9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rpp40Q8R1F9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Rpp40Q8R1F9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms