Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cnot3Q8K0V4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cnot3Q8K0V4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cnot3Q8K0V4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cnot3Q8K0V4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cnot3Q8K0V4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cnot3Q8K0V4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cnot3Q8K0V4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cnot3Q8K0V4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cnot3Q8K0V4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.94■□□□□ 0.78
Cnot3Q8K0V4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.94■□□□□ 0.78
Cnot3Q8K0V4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnot3Q8K0V4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnot3Q8K0V4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.93■□□□□ 0.78
Cnot3Q8K0V4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnot3Q8K0V4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cnot3Q8K0V4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.93■□□□□ 0.78
Cnot3Q8K0V4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnot3Q8K0V4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cnot3Q8K0V4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnot3Q8K0V4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cnot3Q8K0V4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnot3Q8K0V4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnot3Q8K0V4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cnot3Q8K0V4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cnot3Q8K0V4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cnot3Q8K0V4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cnot3Q8K0V4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.92■□□□□ 0.78
Cnot3Q8K0V4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cnot3Q8K0V4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.91■□□□□ 0.78
Cnot3Q8K0V4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cnot3Q8K0V4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cnot3Q8K0V4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cnot3Q8K0V4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cnot3Q8K0V4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cnot3Q8K0V4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cnot3Q8K0V4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cnot3Q8K0V4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cnot3Q8K0V4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.91■□□□□ 0.78
Cnot3Q8K0V4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cnot3Q8K0V4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cnot3Q8K0V4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.9■□□□□ 0.78
Cnot3Q8K0V4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.9■□□□□ 0.78
Cnot3Q8K0V4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cnot3Q8K0V4 Gm45364-201ENSMUST00000210883 159 ntBASIC19.9■□□□□ 0.78
Cnot3Q8K0V4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cnot3Q8K0V4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cnot3Q8K0V4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cnot3Q8K0V4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cnot3Q8K0V4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cnot3Q8K0V4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cnot3Q8K0V4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cnot3Q8K0V4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cnot3Q8K0V4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cnot3Q8K0V4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cnot3Q8K0V4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cnot3Q8K0V4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cnot3Q8K0V4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cnot3Q8K0V4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cnot3Q8K0V4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.88■□□□□ 0.77
Cnot3Q8K0V4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cnot3Q8K0V4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cnot3Q8K0V4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cnot3Q8K0V4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cnot3Q8K0V4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cnot3Q8K0V4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.87■□□□□ 0.77
Cnot3Q8K0V4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cnot3Q8K0V4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cnot3Q8K0V4 Gm8503-201ENSMUST00000118131 455 ntBASIC19.86■□□□□ 0.77
Cnot3Q8K0V4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.86■□□□□ 0.77
Cnot3Q8K0V4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.86■□□□□ 0.77
Cnot3Q8K0V4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cnot3Q8K0V4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cnot3Q8K0V4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Cnot3Q8K0V4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cnot3Q8K0V4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cnot3Q8K0V4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cnot3Q8K0V4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cnot3Q8K0V4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cnot3Q8K0V4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.85■□□□□ 0.77
Cnot3Q8K0V4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cnot3Q8K0V4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cnot3Q8K0V4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Cnot3Q8K0V4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cnot3Q8K0V4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cnot3Q8K0V4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cnot3Q8K0V4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cnot3Q8K0V4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cnot3Q8K0V4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cnot3Q8K0V4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cnot3Q8K0V4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cnot3Q8K0V4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cnot3Q8K0V4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cnot3Q8K0V4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cnot3Q8K0V4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cnot3Q8K0V4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cnot3Q8K0V4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cnot3Q8K0V4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cnot3Q8K0V4 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.82■□□□□ 0.76
Cnot3Q8K0V4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms