Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrif1Q8CDD9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Lrif1Q8CDD9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrif1Q8CDD9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.97■□□□□ 0.95
Lrif1Q8CDD9 Gm16437-201ENSMUST00000025669 507 ntBASIC20.97■□□□□ 0.95
Lrif1Q8CDD9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrif1Q8CDD9 Cap2-205ENSMUST00000225824 1634 ntBASIC20.96■□□□□ 0.95
Lrif1Q8CDD9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrif1Q8CDD9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrif1Q8CDD9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Lrif1Q8CDD9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lrif1Q8CDD9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Lrif1Q8CDD9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrif1Q8CDD9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrif1Q8CDD9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lrif1Q8CDD9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lrif1Q8CDD9 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.94■□□□□ 0.94
Lrif1Q8CDD9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Lrif1Q8CDD9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lrif1Q8CDD9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.94■□□□□ 0.94
Lrif1Q8CDD9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Lrif1Q8CDD9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lrif1Q8CDD9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrif1Q8CDD9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.93■□□□□ 0.94
Lrif1Q8CDD9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrif1Q8CDD9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrif1Q8CDD9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrif1Q8CDD9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrif1Q8CDD9 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.93■□□□□ 0.94
Lrif1Q8CDD9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrif1Q8CDD9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lrif1Q8CDD9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.92■□□□□ 0.94
Lrif1Q8CDD9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrif1Q8CDD9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.92■□□□□ 0.94
Lrif1Q8CDD9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.92■□□□□ 0.94
Lrif1Q8CDD9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrif1Q8CDD9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrif1Q8CDD9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrif1Q8CDD9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.92■□□□□ 0.94
Lrif1Q8CDD9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrif1Q8CDD9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lrif1Q8CDD9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.91■□□□□ 0.94
Lrif1Q8CDD9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lrif1Q8CDD9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrif1Q8CDD9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrif1Q8CDD9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrif1Q8CDD9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Lrif1Q8CDD9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Lrif1Q8CDD9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrif1Q8CDD9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrif1Q8CDD9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrif1Q8CDD9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrif1Q8CDD9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrif1Q8CDD9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Lrif1Q8CDD9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrif1Q8CDD9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrif1Q8CDD9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrif1Q8CDD9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrif1Q8CDD9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Lrif1Q8CDD9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrif1Q8CDD9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.9■□□□□ 0.94
Lrif1Q8CDD9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrif1Q8CDD9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.89■□□□□ 0.94
Lrif1Q8CDD9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Lrif1Q8CDD9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Lrif1Q8CDD9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrif1Q8CDD9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrif1Q8CDD9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrif1Q8CDD9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.88■□□□□ 0.93
Lrif1Q8CDD9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Lrif1Q8CDD9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrif1Q8CDD9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lrif1Q8CDD9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Lrif1Q8CDD9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrif1Q8CDD9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Lrif1Q8CDD9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrif1Q8CDD9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrif1Q8CDD9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.87■□□□□ 0.93
Lrif1Q8CDD9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrif1Q8CDD9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrif1Q8CDD9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrif1Q8CDD9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lrif1Q8CDD9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lrif1Q8CDD9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lrif1Q8CDD9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lrif1Q8CDD9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Lrif1Q8CDD9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lrif1Q8CDD9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lrif1Q8CDD9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lrif1Q8CDD9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lrif1Q8CDD9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lrif1Q8CDD9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Lrif1Q8CDD9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Lrif1Q8CDD9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.85■□□□□ 0.93
Lrif1Q8CDD9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lrif1Q8CDD9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.85■□□□□ 0.93
Lrif1Q8CDD9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrif1Q8CDD9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrif1Q8CDD9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Lrif1Q8CDD9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms