Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Aph1bQ8C7N7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Aph1bQ8C7N7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Aph1bQ8C7N7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Aph1bQ8C7N7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Aph1bQ8C7N7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Aph1bQ8C7N7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Aph1bQ8C7N7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Aph1bQ8C7N7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Aph1bQ8C7N7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Aph1bQ8C7N7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Aph1bQ8C7N7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Aph1bQ8C7N7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Aph1bQ8C7N7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Aph1bQ8C7N7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Aph1bQ8C7N7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Aph1bQ8C7N7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Aph1bQ8C7N7 Gm27502-201ENSMUST00000183495 199 ntBASIC21.16■□□□□ 0.98
Aph1bQ8C7N7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Aph1bQ8C7N7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Aph1bQ8C7N7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Aph1bQ8C7N7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Aph1bQ8C7N7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Aph1bQ8C7N7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.15■□□□□ 0.98
Aph1bQ8C7N7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Aph1bQ8C7N7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Aph1bQ8C7N7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Aph1bQ8C7N7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Aph1bQ8C7N7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Aph1bQ8C7N7 Gm11175-201ENSMUST00000116172 543 ntBASIC21.14■□□□□ 0.97
Aph1bQ8C7N7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Aph1bQ8C7N7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Aph1bQ8C7N7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.14■□□□□ 0.97
Aph1bQ8C7N7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Aph1bQ8C7N7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Aph1bQ8C7N7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Aph1bQ8C7N7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Aph1bQ8C7N7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Aph1bQ8C7N7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Aph1bQ8C7N7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Aph1bQ8C7N7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Aph1bQ8C7N7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Aph1bQ8C7N7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Aph1bQ8C7N7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aph1bQ8C7N7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aph1bQ8C7N7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aph1bQ8C7N7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aph1bQ8C7N7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aph1bQ8C7N7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aph1bQ8C7N7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aph1bQ8C7N7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Aph1bQ8C7N7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Aph1bQ8C7N7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Aph1bQ8C7N7 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.11■□□□□ 0.97
Aph1bQ8C7N7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Aph1bQ8C7N7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Aph1bQ8C7N7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Aph1bQ8C7N7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Aph1bQ8C7N7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Aph1bQ8C7N7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Aph1bQ8C7N7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Aph1bQ8C7N7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Aph1bQ8C7N7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Aph1bQ8C7N7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Aph1bQ8C7N7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Aph1bQ8C7N7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Aph1bQ8C7N7 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.09■□□□□ 0.97
Aph1bQ8C7N7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.09■□□□□ 0.97
Aph1bQ8C7N7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Aph1bQ8C7N7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
Aph1bQ8C7N7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Aph1bQ8C7N7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.09■□□□□ 0.97
Aph1bQ8C7N7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Aph1bQ8C7N7 Gm14523-201ENSMUST00000117260 558 ntBASIC21.08■□□□□ 0.97
Aph1bQ8C7N7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Aph1bQ8C7N7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Aph1bQ8C7N7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aph1bQ8C7N7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aph1bQ8C7N7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Aph1bQ8C7N7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aph1bQ8C7N7 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.07■□□□□ 0.96
Aph1bQ8C7N7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aph1bQ8C7N7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aph1bQ8C7N7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aph1bQ8C7N7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aph1bQ8C7N7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Aph1bQ8C7N7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.06■□□□□ 0.96
Aph1bQ8C7N7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.06■□□□□ 0.96
Aph1bQ8C7N7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Aph1bQ8C7N7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Aph1bQ8C7N7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Aph1bQ8C7N7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Aph1bQ8C7N7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Aph1bQ8C7N7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.05■□□□□ 0.96
Aph1bQ8C7N7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Aph1bQ8C7N7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.05■□□□□ 0.96
Aph1bQ8C7N7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Aph1bQ8C7N7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Aph1bQ8C7N7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Aph1bQ8C7N7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms