Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Brat1Q8C3R1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.55■■□□□ 1.2
Brat1Q8C3R1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.55■■□□□ 1.2
Brat1Q8C3R1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Brat1Q8C3R1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Brat1Q8C3R1 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.54■■□□□ 1.2
Brat1Q8C3R1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.53■■□□□ 1.2
Brat1Q8C3R1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Brat1Q8C3R1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Brat1Q8C3R1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Brat1Q8C3R1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Brat1Q8C3R1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Brat1Q8C3R1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.52■■□□□ 1.2
Brat1Q8C3R1 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.52■■□□□ 1.2
Brat1Q8C3R1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Brat1Q8C3R1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Brat1Q8C3R1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Brat1Q8C3R1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.51■■□□□ 1.19
Brat1Q8C3R1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Brat1Q8C3R1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Brat1Q8C3R1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Brat1Q8C3R1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Brat1Q8C3R1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Brat1Q8C3R1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Brat1Q8C3R1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.5■■□□□ 1.19
Brat1Q8C3R1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Brat1Q8C3R1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Brat1Q8C3R1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
Brat1Q8C3R1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Brat1Q8C3R1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Brat1Q8C3R1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Brat1Q8C3R1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Brat1Q8C3R1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Brat1Q8C3R1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Brat1Q8C3R1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Brat1Q8C3R1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Brat1Q8C3R1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Brat1Q8C3R1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Brat1Q8C3R1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Brat1Q8C3R1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Brat1Q8C3R1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Brat1Q8C3R1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Brat1Q8C3R1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Brat1Q8C3R1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.47■■□□□ 1.19
Brat1Q8C3R1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Brat1Q8C3R1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Brat1Q8C3R1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Brat1Q8C3R1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
Brat1Q8C3R1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Brat1Q8C3R1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.46■■□□□ 1.19
Brat1Q8C3R1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.46■■□□□ 1.19
Brat1Q8C3R1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Brat1Q8C3R1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Brat1Q8C3R1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.45■■□□□ 1.19
Brat1Q8C3R1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Brat1Q8C3R1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Brat1Q8C3R1 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.45■■□□□ 1.18
Brat1Q8C3R1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Brat1Q8C3R1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Brat1Q8C3R1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Brat1Q8C3R1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Brat1Q8C3R1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.45■■□□□ 1.18
Brat1Q8C3R1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Brat1Q8C3R1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Brat1Q8C3R1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.44■■□□□ 1.18
Brat1Q8C3R1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.44■■□□□ 1.18
Brat1Q8C3R1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.44■■□□□ 1.18
Brat1Q8C3R1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Brat1Q8C3R1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Brat1Q8C3R1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Brat1Q8C3R1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Brat1Q8C3R1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Brat1Q8C3R1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Brat1Q8C3R1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Brat1Q8C3R1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Brat1Q8C3R1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Brat1Q8C3R1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Brat1Q8C3R1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Brat1Q8C3R1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Brat1Q8C3R1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Brat1Q8C3R1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.43■■□□□ 1.18
Brat1Q8C3R1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Brat1Q8C3R1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Brat1Q8C3R1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Brat1Q8C3R1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Brat1Q8C3R1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Brat1Q8C3R1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Brat1Q8C3R1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Brat1Q8C3R1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.42■■□□□ 1.18
Brat1Q8C3R1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.42■■□□□ 1.18
Brat1Q8C3R1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Brat1Q8C3R1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Brat1Q8C3R1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.41■■□□□ 1.18
Brat1Q8C3R1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Brat1Q8C3R1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Brat1Q8C3R1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Brat1Q8C3R1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.4■■□□□ 1.18
Brat1Q8C3R1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
Brat1Q8C3R1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.4■■□□□ 1.18
Brat1Q8C3R1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms