Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Terc-201ENSMUST00000082862 423 ntBASIC20.61■□□□□ 0.89
Slc44a2Q8BY89 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Slc44a2Q8BY89 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a2Q8BY89 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a2Q8BY89 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a2Q8BY89 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a2Q8BY89 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a2Q8BY89 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a2Q8BY89 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a2Q8BY89 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a2Q8BY89 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a2Q8BY89 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Slc44a2Q8BY89 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc44a2Q8BY89 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Slc44a2Q8BY89 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a2Q8BY89 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a2Q8BY89 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Slc44a2Q8BY89 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a2Q8BY89 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a2Q8BY89 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a2Q8BY89 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc44a2Q8BY89 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Slc44a2Q8BY89 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a2Q8BY89 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Slc44a2Q8BY89 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a2Q8BY89 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.58■□□□□ 0.89
Slc44a2Q8BY89 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a2Q8BY89 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc44a2Q8BY89 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc44a2Q8BY89 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Slc44a2Q8BY89 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc44a2Q8BY89 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Slc44a2Q8BY89 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.57■□□□□ 0.88
Slc44a2Q8BY89 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a2Q8BY89 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a2Q8BY89 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a2Q8BY89 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.57■□□□□ 0.88
Slc44a2Q8BY89 Scarna2-201ENSMUST00000157560 414 ntBASIC20.57■□□□□ 0.88
Slc44a2Q8BY89 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.57■□□□□ 0.88
Slc44a2Q8BY89 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a2Q8BY89 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a2Q8BY89 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc44a2Q8BY89 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc44a2Q8BY89 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc44a2Q8BY89 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc44a2Q8BY89 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc44a2Q8BY89 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.55■□□□□ 0.88
Slc44a2Q8BY89 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc44a2Q8BY89 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc44a2Q8BY89 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc44a2Q8BY89 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a2Q8BY89 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a2Q8BY89 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Slc44a2Q8BY89 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a2Q8BY89 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a2Q8BY89 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a2Q8BY89 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc44a2Q8BY89 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.54■□□□□ 0.88
Slc44a2Q8BY89 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc44a2Q8BY89 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc44a2Q8BY89 Gm9806-201ENSMUST00000051080 552 ntBASIC20.53■□□□□ 0.88
Slc44a2Q8BY89 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc44a2Q8BY89 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc44a2Q8BY89 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc44a2Q8BY89 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc44a2Q8BY89 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Slc44a2Q8BY89 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Slc44a2Q8BY89 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.52■□□□□ 0.88
Slc44a2Q8BY89 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc44a2Q8BY89 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.52■□□□□ 0.88
Slc44a2Q8BY89 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc44a2Q8BY89 Gm16437-201ENSMUST00000025669 507 ntBASIC20.52■□□□□ 0.88
Slc44a2Q8BY89 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Slc44a2Q8BY89 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc44a2Q8BY89 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Slc44a2Q8BY89 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc44a2Q8BY89 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc44a2Q8BY89 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc44a2Q8BY89 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Slc44a2Q8BY89 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc44a2Q8BY89 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc44a2Q8BY89 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.5■□□□□ 0.87
Slc44a2Q8BY89 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc44a2Q8BY89 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.5■□□□□ 0.87
Slc44a2Q8BY89 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc44a2Q8BY89 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc44a2Q8BY89 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc44a2Q8BY89 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Slc44a2Q8BY89 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc44a2Q8BY89 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc44a2Q8BY89 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.49■□□□□ 0.87
Slc44a2Q8BY89 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Slc44a2Q8BY89 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc44a2Q8BY89 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Slc44a2Q8BY89 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc44a2Q8BY89 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc44a2Q8BY89 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Slc44a2Q8BY89 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.48■□□□□ 0.87
Slc44a2Q8BY89 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc44a2Q8BY89 Gm11687-201ENSMUST00000118911 886 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms