Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SynbQ8BI41 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SynbQ8BI41 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SynbQ8BI41 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SynbQ8BI41 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SynbQ8BI41 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SynbQ8BI41 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SynbQ8BI41 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.18■□□□□ 0.82
SynbQ8BI41 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SynbQ8BI41 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SynbQ8BI41 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SynbQ8BI41 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SynbQ8BI41 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SynbQ8BI41 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.17■□□□□ 0.82
SynbQ8BI41 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.17■□□□□ 0.82
SynbQ8BI41 Gm7417-201ENSMUST00000192950 473 ntBASIC20.17■□□□□ 0.82
SynbQ8BI41 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SynbQ8BI41 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SynbQ8BI41 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.16■□□□□ 0.82
SynbQ8BI41 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SynbQ8BI41 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SynbQ8BI41 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SynbQ8BI41 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.16■□□□□ 0.82
SynbQ8BI41 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SynbQ8BI41 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.16■□□□□ 0.82
SynbQ8BI41 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SynbQ8BI41 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
SynbQ8BI41 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SynbQ8BI41 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SynbQ8BI41 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SynbQ8BI41 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SynbQ8BI41 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SynbQ8BI41 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
SynbQ8BI41 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SynbQ8BI41 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SynbQ8BI41 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.14■□□□□ 0.81
SynbQ8BI41 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.14■□□□□ 0.81
SynbQ8BI41 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SynbQ8BI41 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynbQ8BI41 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynbQ8BI41 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynbQ8BI41 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynbQ8BI41 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynbQ8BI41 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynbQ8BI41 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SynbQ8BI41 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SynbQ8BI41 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.12■□□□□ 0.81
SynbQ8BI41 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.12■□□□□ 0.81
SynbQ8BI41 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SynbQ8BI41 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SynbQ8BI41 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SynbQ8BI41 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SynbQ8BI41 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SynbQ8BI41 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SynbQ8BI41 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SynbQ8BI41 Gm13241-201ENSMUST00000094493 780 ntBASIC20.11■□□□□ 0.81
SynbQ8BI41 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SynbQ8BI41 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
SynbQ8BI41 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SynbQ8BI41 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.11■□□□□ 0.81
SynbQ8BI41 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SynbQ8BI41 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SynbQ8BI41 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SynbQ8BI41 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SynbQ8BI41 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SynbQ8BI41 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SynbQ8BI41 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SynbQ8BI41 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SynbQ8BI41 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SynbQ8BI41 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SynbQ8BI41 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.09■□□□□ 0.81
SynbQ8BI41 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SynbQ8BI41 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SynbQ8BI41 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SynbQ8BI41 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SynbQ8BI41 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SynbQ8BI41 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SynbQ8BI41 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SynbQ8BI41 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SynbQ8BI41 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.07■□□□□ 0.8
SynbQ8BI41 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SynbQ8BI41 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.07■□□□□ 0.8
SynbQ8BI41 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SynbQ8BI41 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SynbQ8BI41 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SynbQ8BI41 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SynbQ8BI41 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SynbQ8BI41 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SynbQ8BI41 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SynbQ8BI41 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SynbQ8BI41 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SynbQ8BI41 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SynbQ8BI41 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SynbQ8BI41 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.06■□□□□ 0.8
SynbQ8BI41 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SynbQ8BI41 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SynbQ8BI41 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SynbQ8BI41 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SynbQ8BI41 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SynbQ8BI41 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms