Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh8Q7TSK3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh8Q7TSK3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdh8Q7TSK3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh8Q7TSK3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.02■□□□□ 0.96
Pcdh8Q7TSK3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh8Q7TSK3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh8Q7TSK3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh8Q7TSK3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdh8Q7TSK3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdh8Q7TSK3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh8Q7TSK3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh8Q7TSK3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh8Q7TSK3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh8Q7TSK3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh8Q7TSK3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh8Q7TSK3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21■□□□□ 0.95
Pcdh8Q7TSK3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21■□□□□ 0.95
Pcdh8Q7TSK3 Gm7417-201ENSMUST00000192950 473 ntBASIC21■□□□□ 0.95
Pcdh8Q7TSK3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21■□□□□ 0.95
Pcdh8Q7TSK3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh8Q7TSK3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh8Q7TSK3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh8Q7TSK3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh8Q7TSK3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
Pcdh8Q7TSK3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh8Q7TSK3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh8Q7TSK3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh8Q7TSK3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh8Q7TSK3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh8Q7TSK3 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.98■□□□□ 0.95
Pcdh8Q7TSK3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.98■□□□□ 0.95
Pcdh8Q7TSK3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Pcdh8Q7TSK3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh8Q7TSK3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh8Q7TSK3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Pcdh8Q7TSK3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh8Q7TSK3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh8Q7TSK3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh8Q7TSK3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdh8Q7TSK3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh8Q7TSK3 Gm15039-201ENSMUST00000118914 875 ntBASIC20.96■□□□□ 0.95
Pcdh8Q7TSK3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdh8Q7TSK3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.96■□□□□ 0.95
Pcdh8Q7TSK3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh8Q7TSK3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh8Q7TSK3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh8Q7TSK3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh8Q7TSK3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh8Q7TSK3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pcdh8Q7TSK3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh8Q7TSK3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pcdh8Q7TSK3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.94■□□□□ 0.94
Pcdh8Q7TSK3 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.94■□□□□ 0.94
Pcdh8Q7TSK3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh8Q7TSK3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh8Q7TSK3 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.93■□□□□ 0.94
Pcdh8Q7TSK3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh8Q7TSK3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh8Q7TSK3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh8Q7TSK3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh8Q7TSK3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh8Q7TSK3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.91■□□□□ 0.94
Pcdh8Q7TSK3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh8Q7TSK3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh8Q7TSK3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh8Q7TSK3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh8Q7TSK3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.91■□□□□ 0.94
Pcdh8Q7TSK3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh8Q7TSK3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdh8Q7TSK3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh8Q7TSK3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh8Q7TSK3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdh8Q7TSK3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdh8Q7TSK3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdh8Q7TSK3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh8Q7TSK3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh8Q7TSK3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.89■□□□□ 0.93
Pcdh8Q7TSK3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh8Q7TSK3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Pcdh8Q7TSK3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh8Q7TSK3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcdh8Q7TSK3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh8Q7TSK3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.89■□□□□ 0.93
Pcdh8Q7TSK3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms