Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Clcn1Q64347 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Clcn1Q64347 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Clcn1Q64347 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC27.19■■□□□ 1.94
Clcn1Q64347 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC27.19■■□□□ 1.94
Clcn1Q64347 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Clcn1Q64347 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Clcn1Q64347 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Clcn1Q64347 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Clcn1Q64347 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Clcn1Q64347 Gm10399-202ENSMUST00000202768 748 ntBASIC27.18■■□□□ 1.94
Clcn1Q64347 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Clcn1Q64347 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Clcn1Q64347 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Clcn1Q64347 Gm6934-201ENSMUST00000194780 1905 ntBASIC27.17■■□□□ 1.94
Clcn1Q64347 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Clcn1Q64347 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Clcn1Q64347 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC27.16■■□□□ 1.94
Clcn1Q64347 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Clcn1Q64347 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC27.16■■□□□ 1.94
Clcn1Q64347 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Clcn1Q64347 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Clcn1Q64347 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
Clcn1Q64347 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Clcn1Q64347 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC27.15■■□□□ 1.94
Clcn1Q64347 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Clcn1Q64347 Gm12922-201ENSMUST00000120626 809 ntBASIC27.14■■□□□ 1.94
Clcn1Q64347 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC27.14■■□□□ 1.94
Clcn1Q64347 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC27.14■■□□□ 1.94
Clcn1Q64347 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC27.14■■□□□ 1.94
Clcn1Q64347 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
Clcn1Q64347 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Clcn1Q64347 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Clcn1Q64347 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Clcn1Q64347 Serp2-204ENSMUST00000228055 705 ntBASIC27.13■■□□□ 1.93
Clcn1Q64347 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Clcn1Q64347 Gm28731-201ENSMUST00000185564 1569 ntBASIC27.13■■□□□ 1.93
Clcn1Q64347 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Clcn1Q64347 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC27.12■■□□□ 1.93
Clcn1Q64347 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC27.12■■□□□ 1.93
Clcn1Q64347 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Clcn1Q64347 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Clcn1Q64347 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Clcn1Q64347 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Clcn1Q64347 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC27.11■■□□□ 1.93
Clcn1Q64347 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Clcn1Q64347 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Clcn1Q64347 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
Clcn1Q64347 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Clcn1Q64347 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Clcn1Q64347 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Clcn1Q64347 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Clcn1Q64347 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Clcn1Q64347 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Clcn1Q64347 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC27.09■■□□□ 1.93
Clcn1Q64347 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Clcn1Q64347 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Clcn1Q64347 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Clcn1Q64347 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Clcn1Q64347 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Clcn1Q64347 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC27.08■■□□□ 1.93
Clcn1Q64347 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Clcn1Q64347 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Clcn1Q64347 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Clcn1Q64347 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Clcn1Q64347 Gm10620-201ENSMUST00000098379 1332 ntBASIC27.08■■□□□ 1.93
Clcn1Q64347 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Clcn1Q64347 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Clcn1Q64347 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Clcn1Q64347 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Clcn1Q64347 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC27.06■■□□□ 1.92
Clcn1Q64347 Gm27454-201ENSMUST00000185090 204 ntBASIC27.06■■□□□ 1.92
Clcn1Q64347 Appbp2os-202ENSMUST00000206972 447 ntBASIC27.06■■□□□ 1.92
Clcn1Q64347 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC27.05■■□□□ 1.92
Clcn1Q64347 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Clcn1Q64347 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC27.05■■□□□ 1.92
Clcn1Q64347 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Clcn1Q64347 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC27.05■■□□□ 1.92
Clcn1Q64347 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Clcn1Q64347 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
Clcn1Q64347 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Clcn1Q64347 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Clcn1Q64347 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Clcn1Q64347 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Clcn1Q64347 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC27.04■■□□□ 1.92
Clcn1Q64347 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Clcn1Q64347 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Clcn1Q64347 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Clcn1Q64347 Gm45417-201ENSMUST00000209533 758 ntBASIC27.03■■□□□ 1.92
Clcn1Q64347 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Clcn1Q64347 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Clcn1Q64347 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Clcn1Q64347 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC27.02■■□□□ 1.92
Clcn1Q64347 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC27.02■■□□□ 1.92
Clcn1Q64347 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
Clcn1Q64347 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Clcn1Q64347 Il17rd-202ENSMUST00000223942 2186 ntBASIC27.01■■□□□ 1.91
Clcn1Q64347 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Clcn1Q64347 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Clcn1Q64347 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 509.9 ms