Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itm2aQ61500 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itm2aQ61500 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itm2aQ61500 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Itm2aQ61500 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itm2aQ61500 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.95■□□□□ 0.94
Itm2aQ61500 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itm2aQ61500 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itm2aQ61500 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.95■□□□□ 0.94
Itm2aQ61500 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Itm2aQ61500 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Itm2aQ61500 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Itm2aQ61500 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Itm2aQ61500 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.94■□□□□ 0.94
Itm2aQ61500 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Itm2aQ61500 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Itm2aQ61500 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itm2aQ61500 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itm2aQ61500 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itm2aQ61500 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Itm2aQ61500 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.92■□□□□ 0.94
Itm2aQ61500 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
Itm2aQ61500 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Itm2aQ61500 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itm2aQ61500 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.91■□□□□ 0.94
Itm2aQ61500 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Itm2aQ61500 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Itm2aQ61500 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Itm2aQ61500 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itm2aQ61500 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itm2aQ61500 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itm2aQ61500 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itm2aQ61500 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itm2aQ61500 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Itm2aQ61500 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Itm2aQ61500 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Itm2aQ61500 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Itm2aQ61500 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Itm2aQ61500 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Itm2aQ61500 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.89■□□□□ 0.93
Itm2aQ61500 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Itm2aQ61500 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Itm2aQ61500 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Itm2aQ61500 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Itm2aQ61500 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Itm2aQ61500 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Itm2aQ61500 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.88■□□□□ 0.93
Itm2aQ61500 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Itm2aQ61500 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.88■□□□□ 0.93
Itm2aQ61500 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Itm2aQ61500 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Itm2aQ61500 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Itm2aQ61500 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Itm2aQ61500 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Itm2aQ61500 Gm44428-201ENSMUST00000204474 874 ntBASIC20.87■□□□□ 0.93
Itm2aQ61500 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Itm2aQ61500 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Itm2aQ61500 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Itm2aQ61500 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Itm2aQ61500 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Itm2aQ61500 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Itm2aQ61500 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Itm2aQ61500 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Itm2aQ61500 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Itm2aQ61500 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Itm2aQ61500 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Itm2aQ61500 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.86■□□□□ 0.93
Itm2aQ61500 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Itm2aQ61500 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Itm2aQ61500 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Itm2aQ61500 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Itm2aQ61500 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Itm2aQ61500 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Itm2aQ61500 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Itm2aQ61500 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Itm2aQ61500 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Itm2aQ61500 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Itm2aQ61500 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.84■□□□□ 0.93
Itm2aQ61500 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.83■□□□□ 0.93
Itm2aQ61500 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Itm2aQ61500 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Itm2aQ61500 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Itm2aQ61500 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Itm2aQ61500 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Itm2aQ61500 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Itm2aQ61500 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Itm2aQ61500 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Itm2aQ61500 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Itm2aQ61500 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.81■□□□□ 0.92
Itm2aQ61500 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.81■□□□□ 0.92
Itm2aQ61500 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Itm2aQ61500 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Itm2aQ61500 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Itm2aQ61500 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Itm2aQ61500 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Itm2aQ61500 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Itm2aQ61500 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.8■□□□□ 0.92
Itm2aQ61500 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Itm2aQ61500 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Itm2aQ61500 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms