Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lin28bQ45KJ6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
Lin28bQ45KJ6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lin28bQ45KJ6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lin28bQ45KJ6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.32■□□□□ 0.84
Lin28bQ45KJ6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lin28bQ45KJ6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lin28bQ45KJ6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Lin28bQ45KJ6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin28bQ45KJ6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Lin28bQ45KJ6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin28bQ45KJ6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin28bQ45KJ6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin28bQ45KJ6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lin28bQ45KJ6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.3■□□□□ 0.84
Lin28bQ45KJ6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Lin28bQ45KJ6 Gm22238-201ENSMUST00000175222 88 ntBASIC20.3■□□□□ 0.84
Lin28bQ45KJ6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lin28bQ45KJ6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lin28bQ45KJ6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lin28bQ45KJ6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lin28bQ45KJ6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lin28bQ45KJ6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Lin28bQ45KJ6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.29■□□□□ 0.84
Lin28bQ45KJ6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lin28bQ45KJ6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lin28bQ45KJ6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lin28bQ45KJ6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lin28bQ45KJ6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lin28bQ45KJ6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lin28bQ45KJ6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Lin28bQ45KJ6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lin28bQ45KJ6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Lin28bQ45KJ6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lin28bQ45KJ6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lin28bQ45KJ6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lin28bQ45KJ6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lin28bQ45KJ6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lin28bQ45KJ6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Lin28bQ45KJ6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lin28bQ45KJ6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lin28bQ45KJ6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lin28bQ45KJ6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lin28bQ45KJ6 Gm10399-202ENSMUST00000202768 748 ntBASIC20.25■□□□□ 0.83
Lin28bQ45KJ6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lin28bQ45KJ6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.25■□□□□ 0.83
Lin28bQ45KJ6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Lin28bQ45KJ6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lin28bQ45KJ6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.24■□□□□ 0.83
Lin28bQ45KJ6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Lin28bQ45KJ6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lin28bQ45KJ6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lin28bQ45KJ6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin28bQ45KJ6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin28bQ45KJ6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lin28bQ45KJ6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin28bQ45KJ6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin28bQ45KJ6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin28bQ45KJ6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.22■□□□□ 0.83
Lin28bQ45KJ6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lin28bQ45KJ6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lin28bQ45KJ6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lin28bQ45KJ6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lin28bQ45KJ6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Lin28bQ45KJ6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin28bQ45KJ6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin28bQ45KJ6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.21■□□□□ 0.83
Lin28bQ45KJ6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Lin28bQ45KJ6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin28bQ45KJ6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin28bQ45KJ6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin28bQ45KJ6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin28bQ45KJ6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lin28bQ45KJ6 Gm9847-201ENSMUST00000052528 599 ntBASIC20.19■□□□□ 0.82
Lin28bQ45KJ6 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.19■□□□□ 0.82
Lin28bQ45KJ6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lin28bQ45KJ6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin28bQ45KJ6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lin28bQ45KJ6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lin28bQ45KJ6 Gm21956-201ENSMUST00000179946 522 ntBASIC20.18■□□□□ 0.82
Lin28bQ45KJ6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lin28bQ45KJ6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.18■□□□□ 0.82
Lin28bQ45KJ6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin28bQ45KJ6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Lin28bQ45KJ6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lin28bQ45KJ6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lin28bQ45KJ6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lin28bQ45KJ6 Gm13241-201ENSMUST00000094493 780 ntBASIC20.17■□□□□ 0.82
Lin28bQ45KJ6 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.17■□□□□ 0.82
Lin28bQ45KJ6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Lin28bQ45KJ6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.16■□□□□ 0.82
Lin28bQ45KJ6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lin28bQ45KJ6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lin28bQ45KJ6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lin28bQ45KJ6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lin28bQ45KJ6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Lin28bQ45KJ6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lin28bQ45KJ6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lin28bQ45KJ6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Lin28bQ45KJ6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms