Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC34.71■■■■□ 3.15
Shroom4Q1W617 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
Shroom4Q1W617 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Shroom4Q1W617 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
Shroom4Q1W617 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Shroom4Q1W617 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
Shroom4Q1W617 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
Shroom4Q1W617 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Shroom4Q1W617 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Shroom4Q1W617 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC34.7■■■■□ 3.15
Shroom4Q1W617 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Shroom4Q1W617 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC34.69■■■■□ 3.14
Shroom4Q1W617 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Shroom4Q1W617 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
Shroom4Q1W617 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC34.68■■■■□ 3.14
Shroom4Q1W617 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC34.68■■■■□ 3.14
Shroom4Q1W617 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Shroom4Q1W617 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC34.67■■■■□ 3.14
Shroom4Q1W617 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC34.67■■■■□ 3.14
Shroom4Q1W617 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Shroom4Q1W617 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC34.67■■■■□ 3.14
Shroom4Q1W617 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC34.66■■■■□ 3.14
Shroom4Q1W617 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC34.66■■■■□ 3.14
Shroom4Q1W617 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Shroom4Q1W617 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Shroom4Q1W617 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Shroom4Q1W617 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC34.65■■■■□ 3.14
Shroom4Q1W617 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC34.65■■■■□ 3.14
Shroom4Q1W617 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC34.65■■■■□ 3.14
Shroom4Q1W617 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC34.65■■■■□ 3.14
Shroom4Q1W617 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Shroom4Q1W617 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC34.64■■■■□ 3.14
Shroom4Q1W617 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Shroom4Q1W617 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
Shroom4Q1W617 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Shroom4Q1W617 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Shroom4Q1W617 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Shroom4Q1W617 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Shroom4Q1W617 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Shroom4Q1W617 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Shroom4Q1W617 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Shroom4Q1W617 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC34.62■■■■□ 3.13
Shroom4Q1W617 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC34.61■■■■□ 3.13
Shroom4Q1W617 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC34.61■■■■□ 3.13
Shroom4Q1W617 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC34.61■■■■□ 3.13
Shroom4Q1W617 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Shroom4Q1W617 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Shroom4Q1W617 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
Shroom4Q1W617 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
Shroom4Q1W617 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC34.6■■■■□ 3.13
Shroom4Q1W617 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Shroom4Q1W617 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC34.6■■■■□ 3.13
Shroom4Q1W617 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Shroom4Q1W617 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC34.6■■■■□ 3.13
Shroom4Q1W617 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Shroom4Q1W617 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
Shroom4Q1W617 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC34.57■■■■□ 3.12
Shroom4Q1W617 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC34.57■■■■□ 3.12
Shroom4Q1W617 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
Shroom4Q1W617 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC34.57■■■■□ 3.12
Shroom4Q1W617 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC34.56■■■■□ 3.12
Shroom4Q1W617 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Shroom4Q1W617 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Shroom4Q1W617 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Shroom4Q1W617 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Shroom4Q1W617 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Shroom4Q1W617 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Shroom4Q1W617 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Shroom4Q1W617 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
Shroom4Q1W617 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Shroom4Q1W617 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC34.54■■■■□ 3.12
Shroom4Q1W617 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC34.54■■■■□ 3.12
Shroom4Q1W617 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Shroom4Q1W617 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Shroom4Q1W617 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Shroom4Q1W617 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Shroom4Q1W617 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Shroom4Q1W617 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC34.52■■■■□ 3.12
Shroom4Q1W617 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
Shroom4Q1W617 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Shroom4Q1W617 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Shroom4Q1W617 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC34.51■■■■□ 3.12
Shroom4Q1W617 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.12
Shroom4Q1W617 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC34.51■■■■□ 3.12
Shroom4Q1W617 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Shroom4Q1W617 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC34.51■■■■□ 3.11
Shroom4Q1W617 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC34.51■■■■□ 3.11
Shroom4Q1W617 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC34.51■■■■□ 3.11
Shroom4Q1W617 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC34.51■■■■□ 3.11
Shroom4Q1W617 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
Shroom4Q1W617 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Shroom4Q1W617 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Shroom4Q1W617 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Shroom4Q1W617 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Shroom4Q1W617 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Shroom4Q1W617 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.48■■■■□ 3.11
Shroom4Q1W617 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Shroom4Q1W617 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC34.47■■■■□ 3.11
Shroom4Q1W617 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC34.47■■■■□ 3.11
Shroom4Q1W617 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC34.47■■■■□ 3.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms