Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a1P61620 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a1P61620 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a1P61620 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a1P61620 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a1P61620 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Sec61a1P61620 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sec61a1P61620 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sec61a1P61620 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.59■□□□□ 0.57
Sec61a1P61620 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sec61a1P61620 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sec61a1P61620 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sec61a1P61620 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.59■□□□□ 0.57
Sec61a1P61620 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sec61a1P61620 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sec61a1P61620 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sec61a1P61620 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sec61a1P61620 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.58■□□□□ 0.56
Sec61a1P61620 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sec61a1P61620 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sec61a1P61620 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sec61a1P61620 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sec61a1P61620 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sec61a1P61620 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sec61a1P61620 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sec61a1P61620 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sec61a1P61620 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sec61a1P61620 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.57■□□□□ 0.56
Sec61a1P61620 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sec61a1P61620 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sec61a1P61620 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a1P61620 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.56■□□□□ 0.56
Sec61a1P61620 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.56■□□□□ 0.56
Sec61a1P61620 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a1P61620 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a1P61620 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a1P61620 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.56■□□□□ 0.56
Sec61a1P61620 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a1P61620 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a1P61620 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sec61a1P61620 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.56■□□□□ 0.56
Sec61a1P61620 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Sec61a1P61620 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a1P61620 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Sec61a1P61620 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Sec61a1P61620 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a1P61620 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Sec61a1P61620 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.54■□□□□ 0.56
Sec61a1P61620 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.54■□□□□ 0.56
Sec61a1P61620 Gm44428-201ENSMUST00000204474 874 ntBASIC18.54■□□□□ 0.56
Sec61a1P61620 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Sec61a1P61620 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sec61a1P61620 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a1P61620 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a1P61620 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a1P61620 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.53■□□□□ 0.56
Sec61a1P61620 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a1P61620 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a1P61620 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a1P61620 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a1P61620 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sec61a1P61620 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a1P61620 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Sec61a1P61620 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sec61a1P61620 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sec61a1P61620 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sec61a1P61620 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.52■□□□□ 0.55
Sec61a1P61620 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sec61a1P61620 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sec61a1P61620 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sec61a1P61620 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sec61a1P61620 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sec61a1P61620 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.51■□□□□ 0.55
Sec61a1P61620 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sec61a1P61620 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sec61a1P61620 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sec61a1P61620 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sec61a1P61620 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sec61a1P61620 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sec61a1P61620 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Sec61a1P61620 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sec61a1P61620 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sec61a1P61620 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Sec61a1P61620 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sec61a1P61620 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sec61a1P61620 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a1P61620 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a1P61620 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a1P61620 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a1P61620 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sec61a1P61620 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a1P61620 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a1P61620 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a1P61620 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a1P61620 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a1P61620 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a1P61620 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a1P61620 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a1P61620 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a1P61620 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms