Protein–RNA interactions for Protein: P51676

Ccr1l1, C-C chemokine receptor 1-like protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1l1P51676 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr1l1P51676 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr1l1P51676 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ccr1l1P51676 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ccr1l1P51676 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1l1P51676 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1l1P51676 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1l1P51676 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1l1P51676 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1l1P51676 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1l1P51676 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1l1P51676 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1l1P51676 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1l1P51676 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.25■□□□□ 0.67
Ccr1l1P51676 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1l1P51676 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1l1P51676 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1l1P51676 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1l1P51676 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1l1P51676 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1l1P51676 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccr1l1P51676 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.24■□□□□ 0.67
Ccr1l1P51676 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1l1P51676 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.24■□□□□ 0.67
Ccr1l1P51676 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccr1l1P51676 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.23■□□□□ 0.67
Ccr1l1P51676 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Ccr1l1P51676 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr1l1P51676 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr1l1P51676 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1l1P51676 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1l1P51676 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1l1P51676 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1l1P51676 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccr1l1P51676 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.22■□□□□ 0.67
Ccr1l1P51676 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1l1P51676 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1l1P51676 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccr1l1P51676 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1l1P51676 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ccr1l1P51676 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Ccr1l1P51676 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccr1l1P51676 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccr1l1P51676 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1l1P51676 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1l1P51676 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccr1l1P51676 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccr1l1P51676 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
Ccr1l1P51676 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1l1P51676 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccr1l1P51676 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1l1P51676 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1l1P51676 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1l1P51676 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1l1P51676 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1l1P51676 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.19■□□□□ 0.66
Ccr1l1P51676 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ccr1l1P51676 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1l1P51676 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Ccr1l1P51676 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccr1l1P51676 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1l1P51676 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1l1P51676 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1l1P51676 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1l1P51676 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ccr1l1P51676 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1l1P51676 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccr1l1P51676 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1l1P51676 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1l1P51676 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1l1P51676 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ccr1l1P51676 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1l1P51676 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1l1P51676 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.17■□□□□ 0.66
Ccr1l1P51676 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1l1P51676 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccr1l1P51676 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccr1l1P51676 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ccr1l1P51676 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1l1P51676 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1l1P51676 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1l1P51676 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccr1l1P51676 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccr1l1P51676 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccr1l1P51676 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ccr1l1P51676 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccr1l1P51676 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 228 ms