Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Sox2P48432 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox2P48432 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.93■□□□□ 0.78
Sox2P48432 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Sox2P48432 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox2P48432 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox2P48432 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Sox2P48432 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox2P48432 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox2P48432 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox2P48432 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Sox2P48432 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
Sox2P48432 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.91■□□□□ 0.78
Sox2P48432 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sox2P48432 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox2P48432 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox2P48432 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox2P48432 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox2P48432 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox2P48432 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sox2P48432 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.91■□□□□ 0.78
Sox2P48432 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sox2P48432 Gm7432-201ENSMUST00000210343 879 ntBASIC19.91■□□□□ 0.78
Sox2P48432 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.91■□□□□ 0.78
Sox2P48432 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.91■□□□□ 0.78
Sox2P48432 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox2P48432 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox2P48432 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox2P48432 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox2P48432 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox2P48432 Gm11599-201ENSMUST00000118720 878 ntBASIC19.9■□□□□ 0.78
Sox2P48432 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox2P48432 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox2P48432 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox2P48432 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.89■□□□□ 0.77
Sox2P48432 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sox2P48432 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox2P48432 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox2P48432 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox2P48432 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Sox2P48432 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox2P48432 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.88■□□□□ 0.77
Sox2P48432 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox2P48432 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox2P48432 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox2P48432 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Sox2P48432 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox2P48432 Notumos-201ENSMUST00000151998 2659 ntBASIC19.87■□□□□ 0.77
Sox2P48432 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.87■□□□□ 0.77
Sox2P48432 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox2P48432 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox2P48432 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox2P48432 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox2P48432 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox2P48432 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox2P48432 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sox2P48432 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
Sox2P48432 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Sox2P48432 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox2P48432 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sox2P48432 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sox2P48432 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox2P48432 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox2P48432 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox2P48432 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox2P48432 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.84■□□□□ 0.77
Sox2P48432 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sox2P48432 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox2P48432 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sox2P48432 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.84■□□□□ 0.77
Sox2P48432 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sox2P48432 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox2P48432 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Sox2P48432 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
Sox2P48432 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox2P48432 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox2P48432 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox2P48432 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox2P48432 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox2P48432 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox2P48432 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox2P48432 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox2P48432 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox2P48432 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.82■□□□□ 0.76
Sox2P48432 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox2P48432 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox2P48432 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox2P48432 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox2P48432 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sox2P48432 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox2P48432 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox2P48432 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox2P48432 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox2P48432 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.81■□□□□ 0.76
Sox2P48432 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox2P48432 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox2P48432 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sox2P48432 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.8■□□□□ 0.76
Sox2P48432 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Sox2P48432 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms