Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps4bP46467 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.57■■□□□ 1.04
Vps4bP46467 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.57■■□□□ 1.04
Vps4bP46467 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps4bP46467 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps4bP46467 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.56■■□□□ 1.04
Vps4bP46467 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps4bP46467 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps4bP46467 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.56■■□□□ 1.04
Vps4bP46467 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps4bP46467 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps4bP46467 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vps4bP46467 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vps4bP46467 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.55■■□□□ 1.04
Vps4bP46467 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps4bP46467 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps4bP46467 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps4bP46467 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.54■■□□□ 1.04
Vps4bP46467 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps4bP46467 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps4bP46467 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Vps4bP46467 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.54■■□□□ 1.04
Vps4bP46467 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps4bP46467 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.54■■□□□ 1.04
Vps4bP46467 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps4bP46467 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps4bP46467 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.53■■□□□ 1.04
Vps4bP46467 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps4bP46467 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps4bP46467 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vps4bP46467 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Vps4bP46467 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Vps4bP46467 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps4bP46467 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps4bP46467 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps4bP46467 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps4bP46467 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps4bP46467 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vps4bP46467 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vps4bP46467 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps4bP46467 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps4bP46467 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Vps4bP46467 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps4bP46467 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Vps4bP46467 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Vps4bP46467 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Vps4bP46467 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps4bP46467 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps4bP46467 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps4bP46467 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
Vps4bP46467 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps4bP46467 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Vps4bP46467 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps4bP46467 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps4bP46467 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vps4bP46467 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Vps4bP46467 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vps4bP46467 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vps4bP46467 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.49■■□□□ 1.03
Vps4bP46467 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Vps4bP46467 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vps4bP46467 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps4bP46467 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.49■■□□□ 1.03
Vps4bP46467 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps4bP46467 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps4bP46467 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps4bP46467 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Vps4bP46467 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps4bP46467 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps4bP46467 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vps4bP46467 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Vps4bP46467 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps4bP46467 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps4bP46467 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps4bP46467 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.47■■□□□ 1.03
Vps4bP46467 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.47■■□□□ 1.03
Vps4bP46467 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps4bP46467 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Vps4bP46467 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Vps4bP46467 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps4bP46467 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps4bP46467 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps4bP46467 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.46■■□□□ 1.03
Vps4bP46467 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps4bP46467 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Vps4bP46467 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Vps4bP46467 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
Vps4bP46467 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vps4bP46467 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vps4bP46467 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.45■■□□□ 1.02
Vps4bP46467 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps4bP46467 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vps4bP46467 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps4bP46467 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps4bP46467 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps4bP46467 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps4bP46467 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps4bP46467 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps4bP46467 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps4bP46467 Gm14523-201ENSMUST00000117260 558 ntBASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms