Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.84■□□□□ 0.77
Sox6P40645 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.84■□□□□ 0.77
Sox6P40645 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.84■□□□□ 0.77
Sox6P40645 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox6P40645 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox6P40645 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Sox6P40645 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox6P40645 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox6P40645 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.83■□□□□ 0.77
Sox6P40645 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox6P40645 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.83■□□□□ 0.77
Sox6P40645 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.83■□□□□ 0.76
Sox6P40645 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sox6P40645 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sox6P40645 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox6P40645 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox6P40645 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Sox6P40645 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox6P40645 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox6P40645 Gm14523-201ENSMUST00000117260 558 ntBASIC19.82■□□□□ 0.76
Sox6P40645 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.82■□□□□ 0.76
Sox6P40645 Gm12366-201ENSMUST00000121722 873 ntBASIC19.82■□□□□ 0.76
Sox6P40645 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.82■□□□□ 0.76
Sox6P40645 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.82■□□□□ 0.76
Sox6P40645 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Sox6P40645 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.82■□□□□ 0.76
Sox6P40645 Gm5786-201ENSMUST00000085368 882 ntBASIC19.82■□□□□ 0.76
Sox6P40645 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sox6P40645 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sox6P40645 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.82■□□□□ 0.76
Sox6P40645 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.81■□□□□ 0.76
Sox6P40645 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.81■□□□□ 0.76
Sox6P40645 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox6P40645 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sox6P40645 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.81■□□□□ 0.76
Sox6P40645 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox6P40645 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox6P40645 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox6P40645 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox6P40645 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sox6P40645 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sox6P40645 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sox6P40645 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox6P40645 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox6P40645 Gm7332-201ENSMUST00000118351 454 ntBASIC19.79■□□□□ 0.76
Sox6P40645 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox6P40645 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sox6P40645 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox6P40645 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox6P40645 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox6P40645 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox6P40645 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sox6P40645 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox6P40645 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sox6P40645 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox6P40645 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sox6P40645 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox6P40645 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox6P40645 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox6P40645 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox6P40645 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Sox6P40645 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sox6P40645 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.77■□□□□ 0.76
Sox6P40645 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sox6P40645 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox6P40645 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sox6P40645 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox6P40645 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sox6P40645 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sox6P40645 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Sox6P40645 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sox6P40645 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Sox6P40645 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox6P40645 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.76■□□□□ 0.75
Sox6P40645 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox6P40645 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox6P40645 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox6P40645 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sox6P40645 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.75■□□□□ 0.75
Sox6P40645 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Sox6P40645 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox6P40645 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sox6P40645 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.74■□□□□ 0.75
Sox6P40645 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox6P40645 Cap2-205ENSMUST00000225824 1634 ntBASIC19.74■□□□□ 0.75
Sox6P40645 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.74■□□□□ 0.75
Sox6P40645 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.74■□□□□ 0.75
Sox6P40645 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox6P40645 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox6P40645 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox6P40645 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox6P40645 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox6P40645 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox6P40645 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox6P40645 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox6P40645 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox6P40645 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.73■□□□□ 0.75
Sox6P40645 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox6P40645 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox6P40645 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms