Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Pcdha4O88689 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha4O88689 Gm15546-201ENSMUST00000122095 826 ntBASIC23.94■■□□□ 1.42
Pcdha4O88689 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha4O88689 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha4O88689 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha4O88689 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Pcdha4O88689 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha4O88689 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha4O88689 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha4O88689 Gm10232-201ENSMUST00000089221 720 ntBASIC23.93■■□□□ 1.42
Pcdha4O88689 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha4O88689 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.93■■□□□ 1.42
Pcdha4O88689 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.92■■□□□ 1.42
Pcdha4O88689 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha4O88689 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha4O88689 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha4O88689 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha4O88689 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha4O88689 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha4O88689 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
Pcdha4O88689 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha4O88689 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha4O88689 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha4O88689 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha4O88689 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Pcdha4O88689 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha4O88689 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha4O88689 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.9■■□□□ 1.42
Pcdha4O88689 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha4O88689 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.89■■□□□ 1.41
Pcdha4O88689 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdha4O88689 Gm15820-201ENSMUST00000201566 728 ntBASIC23.88■■□□□ 1.41
Pcdha4O88689 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.88■■□□□ 1.41
Pcdha4O88689 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha4O88689 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha4O88689 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha4O88689 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha4O88689 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha4O88689 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.87■■□□□ 1.41
Pcdha4O88689 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha4O88689 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha4O88689 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha4O88689 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.87■■□□□ 1.41
Pcdha4O88689 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Pcdha4O88689 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha4O88689 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Pcdha4O88689 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.86■■□□□ 1.41
Pcdha4O88689 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha4O88689 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha4O88689 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.85■■□□□ 1.41
Pcdha4O88689 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.85■■□□□ 1.41
Pcdha4O88689 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha4O88689 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.85■■□□□ 1.41
Pcdha4O88689 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Pcdha4O88689 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.84■■□□□ 1.41
Pcdha4O88689 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.84■■□□□ 1.41
Pcdha4O88689 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Pcdha4O88689 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha4O88689 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha4O88689 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha4O88689 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdha4O88689 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
Pcdha4O88689 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.82■■□□□ 1.4
Pcdha4O88689 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha4O88689 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha4O88689 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha4O88689 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Pcdha4O88689 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha4O88689 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha4O88689 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha4O88689 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.82■■□□□ 1.4
Pcdha4O88689 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha4O88689 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha4O88689 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha4O88689 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.81■■□□□ 1.4
Pcdha4O88689 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha4O88689 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.81■■□□□ 1.4
Pcdha4O88689 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha4O88689 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Pcdha4O88689 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Pcdha4O88689 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
Pcdha4O88689 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcdha4O88689 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.8■■□□□ 1.4
Pcdha4O88689 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.8■■□□□ 1.4
Pcdha4O88689 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha4O88689 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha4O88689 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha4O88689 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha4O88689 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.78■■□□□ 1.4
Pcdha4O88689 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha4O88689 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha4O88689 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha4O88689 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha4O88689 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha4O88689 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha4O88689 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha4O88689 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha4O88689 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha4O88689 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms